Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_571844.2 claudin j [Danio rerio] ... Query length: 210 aa

Query: claudin j ...

claudin j [Danio rerio]

210 aa protein

accession:NP_571844.2

Sequence Identical proteins

claudin 29 ...

claudin 29 [Danio rerio]

210 aa protein

accession:NP_001017771.1

Alignment Sequence Identical proteins

claudin-3 ...

claudin-3 [Homo sapiens]

220 aa protein

accession:NP_001297.1

Alignment Sequence Identical proteins

claudin-3 ...

claudin-3 [Rattus norvegicus]

219 aa protein

accession:NP_113888.2

Alignment Sequence Identical proteins

claudin-4 ...

claudin-4 [Mus musculus]

210 aa protein

accession:NP_034033.1

Alignment Sequence Identical proteins

claudin e ...

claudin e [Danio rerio]

209 aa protein

accession:NP_571840.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001017771.1\|	claudin 29 [Danio rerio]	232	232	94%	2e-76	52.26%	NP_001017771.1
2 Select seq ref\|NP_001297.1\|	claudin-3 [Homo sapiens]	220	220	100%	1e-71	52.29%	NP_001297.1
3 Select seq ref\|NP_113888.2\|	claudin-3 [Rattus norvegicus]	219	219	100%	2e-71	51.38%	NP_113888.2
4 Select seq ref\|NP_034033.1\|	claudin-4 [Mus musculus]	216	216	97%	3e-70	50.00%	NP_034033.1
5 Select seq ref\|NP_571840.1\|	claudin e [Danio rerio]	229	229	96%	2e-75	50.99%	NP_571840.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments