Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_587828.1 DNA repair protein Rhp42 [Schizosaccharomyces pombe] ... Query length: 686 aa

Rad4p ...

Rad4p [Saccharomyces cerevisiae S288C]

754 aa protein

accession:NP_011089.4

Alignment Sequence Identical proteins

Query: DNA repair protein Rhp42 ...

DNA repair protein Rhp42 [Schizosaccharomyces pombe]

686 aa protein

accession:NP_587828.1

Sequence Identical proteins

xeroderma pigmentosum, complementation group C, isoform A ...

xeroderma pigmentosum, complementation group C, isoform A [Drosophila melanogaster]

1293 aa protein

accession:NP_476861.1

Alignment Sequence Identical proteins

DNA repair protein complementing XP-C cells homolog ...

DNA repair protein complementing XP-C cells homolog [Mus musculus]

930 aa protein

accession:NP_033557.2

Alignment Sequence Identical proteins

DNA repair protein complementing XP-C cells ...

DNA repair protein complementing XP-C cells [Rattus norvegicus]

933 aa protein

accession:NP_001101344.1

Alignment Sequence Identical proteins

DNA repair protein complementing XP-C cells isoform 3 ...

DNA repair protein complementing XP-C cells isoform 3 [Homo sapiens]

747 aa protein

accession:NP_001341655.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_011089.4\|	Rad4p [Saccharomyces cerevisiae S288C]	201	201	90%	5e-54	28.64%	NP_011089.4
2 Select seq ref\|NP_476861.1\|	xeroderma pigmentosum, complementation group C, isoform A [Drosophila melanogaster]	179	179	52%	2e-45	34.05%	NP_476861.1
3 Select seq ref\|NP_033557.2\|	DNA repair protein complementing XP-C cells homolog [Mus musculus]	154	154	52%	2e-37	31.02%	NP_033557.2
4 Select seq ref\|NP_001341655.1\|	DNA repair protein complementing XP-C cells isoform 3 [Homo sapiens]	152	152	52%	3e-37	30.47%	NP_001341655.1
5 Select seq ref\|NP_001101344.1\|	DNA repair protein complementing XP-C cells [Rattus norvegicus]	150	150	52%	3e-36	29.92%	NP_001101344.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments