Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_588193.1
SAGA complex subunit Spt3 [Schizosaccharomyces pombe]
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Query length:
307 aa
DOMAINS: and other(s) domains
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transcription initiation protein SPT3 homolog
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transcription initiation protein SPT3 homolog [Rattus norvegicus]
317 aa protein
accession:NP_001414364.1
transcription initiation protein SPT3 homolog
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transcription initiation protein SPT3 homolog [Mus musculus]
374 aa protein
accession:NP_848767.1
transcription initiation protein SPT3 homolog isoform X2
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transcription initiation protein SPT3 homolog isoform X2 [Rattus norvegicus]
374 aa protein
accession:XP_038940755.1
transcription initiation protein SPT3 homolog isoform X3
...
transcription initiation protein SPT3 homolog isoform X3 [Rattus norvegicus]
365 aa protein
accession:XP_063123814.1
Query: SAGA complex subunit Spt3
...
SAGA complex subunit Spt3 [Schizosaccharomyces pombe]
307 aa protein
accession:NP_588193.1
transcriptional regulator SPT3
...
transcriptional regulator SPT3 [Saccharomyces cerevisiae S288C]
337 aa protein
accession:NP_010680.1
DOMAINS: and other(s) domains
...
transcription initiation protein SPT3 homolog [Rattus norvegicus]
317 aa protein
accession:NP_001414364.1
transcription initiation protein SPT3 homolog [Mus musculus]
374 aa protein
accession:NP_848767.1
transcription initiation protein SPT3 homolog isoform X2 [Rattus norvegicus]
374 aa protein
accession:XP_038940755.1
transcription initiation protein SPT3 homolog isoform X3 [Rattus norvegicus]
365 aa protein
accession:XP_063123814.1
SAGA complex subunit Spt3 [Schizosaccharomyces pombe]
307 aa protein
accession:NP_588193.1
transcriptional regulator SPT3 [Saccharomyces cerevisiae S288C]
337 aa protein
accession:NP_010680.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 279 | 279 | 97% | 1e-91 | 46.41% | NP_010680.1 | |
| 2 | 126 | 126 | 90% | 9e-33 | 30.90% | NP_001414364.1 | |
| 3 | 120 | 120 | 80% | 5e-30 | 32.40% | NP_848767.1 | |
| 4 | 120 | 120 | 75% | 5e-30 | 32.63% | XP_063123814.1 | |
| 5 | 120 | 120 | 75% | 6e-30 | 32.63% | XP_038940755.1 |