Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_593409.2
HOPS complex subunit Vps41 [Schizosaccharomyces pombe]
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Query length:
871 aa
DOMAINS: and other(s) domains
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Query: HOPS complex subunit Vps41
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HOPS complex subunit Vps41 [Schizosaccharomyces pombe]
871 aa protein
accession:NP_593409.2
vacuolar protein sorting-associated protein 41 homolog
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vacuolar protein sorting-associated protein 41 homolog [Glycine max]
957 aa protein
accession:XP_003540777.1
vacuolar protein sorting 41
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vacuolar protein sorting 41 [Arabidopsis thaliana]
980 aa protein
accession:NP_172297.2
vacuolar protein sorting-associated protein 41 homolog
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vacuolar protein sorting-associated protein 41 homolog [Rattus norvegicus]
853 aa protein
accession:NP_001386247.1
vacuolar protein sorting-associated protein 41 homolog
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vacuolar protein sorting-associated protein 41 homolog [Mus musculus]
853 aa protein
accession:NP_742118.3
vacuolar protein sorting-associated protein 41 homolog
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vacuolar protein sorting-associated protein 41 homolog [Danio rerio]
854 aa protein
accession:NP_001410716.1
DOMAINS: and other(s) domains
...
HOPS complex subunit Vps41 [Schizosaccharomyces pombe]
871 aa protein
accession:NP_593409.2
vacuolar protein sorting-associated protein 41 homolog [Glycine max]
957 aa protein
accession:XP_003540777.1
vacuolar protein sorting 41 [Arabidopsis thaliana]
980 aa protein
accession:NP_172297.2
vacuolar protein sorting-associated protein 41 homolog [Rattus norvegicus]
853 aa protein
accession:NP_001386247.1
vacuolar protein sorting-associated protein 41 homolog [Mus musculus]
853 aa protein
accession:NP_742118.3
vacuolar protein sorting-associated protein 41 homolog [Danio rerio]
854 aa protein
accession:NP_001410716.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 409 | 409 | 88% | 4e-127 | 30.25% | XP_003540777.1 | |
| 2 | 384 | 384 | 87% | 1e-117 | 29.31% | NP_172297.2 | |
| 3 | 377 | 377 | 87% | 3e-116 | 29.82% | NP_001386247.1 | |
| 4 | 377 | 377 | 87% | 6e-116 | 29.79% | NP_001410716.1 | |
| 5 | 376 | 376 | 87% | 8e-116 | 29.69% | NP_742118.3 |