Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_594945.1 U2 auxiliary factor small subunit Uaf2 [Schizosaccharomyces pombe] ... Query length: 216 aa

splicing factor U2af small subunit B ...

splicing factor U2af small subunit B [Glycine max]

315 aa protein

accession:XP_003540217.1

Alignment Sequence Identical proteins

Query: U2 auxiliary factor small subunit Uaf2 ...

U2 auxiliary factor small subunit Uaf2 [Schizosaccharomyces pombe]

216 aa protein

accession:NP_594945.1

Sequence Identical proteins

splicing factor U2AF 35 kDa subunit ...

splicing factor U2AF 35 kDa subunit [Danio rerio]

249 aa protein

accession:NP_803432.1

Alignment Sequence Identical proteins

splicing factor U2AF 35 kDa subunit isoform b ...

splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]

240 aa protein

accession:NP_001020374.1

Alignment Sequence Identical proteins

splicing factor U2AF 35 kDa subunit isoform 2 ...

splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]

239 aa protein

accession:NP_001157241.1

Alignment Sequence Identical proteins

U2 small nuclear riboprotein auxiliary factor 38, isoform B ...

U2 small nuclear riboprotein auxiliary factor 38, isoform B [Drosophila melanogaster]

264 aa protein

accession:NP_001259814.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001157241.1\|	splicing factor U2AF 35 kDa subunit isoform 2 [Mus musculus]	239	239	82%	7e-79	61.08%	NP_001157241.1
2 Select seq ref\|NP_001020374.1\|	splicing factor U2AF 35 kDa subunit isoform b [Homo sapiens]	239	239	82%	7e-79	61.08%	NP_001020374.1
3 Select seq ref\|NP_803432.1\|	splicing factor U2AF 35 kDa subunit [Danio rerio]	236	236	82%	2e-77	59.78%	NP_803432.1
4 Select seq ref\|NP_001259814.1\|	U2 small nuclear riboprotein auxiliary factor 38, isoform B [Drosophila melanogaster]	234	234	82%	2e-76	58.82%	NP_001259814.1
5 Select seq ref\|XP_003540217.1\|	splicing factor U2af small subunit B [Glycine max]	226	226	82%	6e-73	56.52%	XP_003540217.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments