Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_596808.1 heterochromatin (HP1) family chromodomain protein Chp2 [Schizosaccharomyces pombe] ... Query length: 380 aa

chromo domain-containing protein ...

chromo domain-containing protein [Dictyostelium discoideum AX4]

239 aa protein

accession:XP_646612.1

Alignment Sequence Identical proteins

heterochromatin protein 1c ...

heterochromatin protein 1c [Drosophila melanogaster]

237 aa protein

accession:NP_651093.1

Alignment Sequence Identical proteins

chromobox protein homolog 3b ...

chromobox protein homolog 3b [Danio rerio]

194 aa protein

accession:NP_001373276.1

Alignment Sequence Identical proteins

chromobox protein homolog 3 ...

chromobox protein homolog 3 [Mus musculus]

183 aa protein

accession:NP_001341931.1

Alignment Sequence Identical proteins

Query: heterochromatin (HP1) family chromodomain protein Chp2 ...

heterochromatin (HP1) family chromodomain protein Chp2 [Schizosaccharomyces pombe]

380 aa protein

accession:NP_596808.1

Sequence Identical proteins

heterochromatin (HP1) family chromodomain protein Swi6 ...

heterochromatin (HP1) family chromodomain protein Swi6 [Schizosaccharomyces pombe]

328 aa protein

accession:NP_593449.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_593449.1\|	heterochromatin (HP1) family chromodomain protein Swi6 [Schizosaccharomyces pombe]	135	135	52%	3e-35	30.96%	NP_593449.1
2 Select seq ref\|NP_651093.1\|	heterochromatin protein 1c [Drosophila melanogaster]	52.0	52.0	14%	2e-06	46.43%	NP_651093.1
3 Select seq ref\|NP_001373276.1\|	chromobox protein homolog 3b [Danio rerio]	48.9	48.9	56%	2e-05	26.39%	NP_001373276.1
4 Select seq ref\|NP_001341931.1\|	chromobox protein homolog 3 [Mus musculus]	48.1	48.1	15%	3e-05	45.61%	NP_001341931.1
5 Select seq ref\|XP_646612.1\|	chromo domain-containing protein [Dictyostelium discoideum AX4]	44.7	44.7	53%	7e-04	25.46%	XP_646612.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments