Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_598754.2 periodic tryptophan protein 1 homolog [Mus musculus] ... Query length: 501 aa

GATOR2 complex protein WDR24 isoform X1 ...

GATOR2 complex protein WDR24 isoform X1 [Rattus norvegicus]

815 aa protein

accession:XP_063125385.1

Alignment Sequence Identical proteins

katanin p80 WD40 repeat-containing subunit B1 isoform X2 ...

katanin p80 WD40 repeat-containing subunit B1 isoform X2 [Danio rerio]

634 aa protein

accession:XP_068078310.1

Alignment Sequence Identical proteins

periodic tryptophan protein 1, putative ...

periodic tryptophan protein 1, putative [Plasmodium falciparum 3D7]

502 aa protein

accession:XP_024329170.1

Alignment Sequence Identical proteins

Query: periodic tryptophan protein 1 homolog ...

periodic tryptophan protein 1 homolog [Mus musculus]

501 aa protein

accession:NP_598754.2

Sequence Identical proteins

rRNA-processing protein PWP1 ...

rRNA-processing protein PWP1 [Saccharomyces cerevisiae S288C]

576 aa protein

accession:NP_013297.1

Alignment Sequence Identical proteins

hypothetical protein, conserved ...

hypothetical protein, conserved [Leishmania donovani]

434 aa protein

accession:XP_003861246.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_013297.1\|	rRNA-processing protein PWP1 [Saccharomyces cerevisiae S288C]	222	222	92%	9e-65	33.65%	NP_013297.1
2 Select seq ref\|XP_003861246.1\|	hypothetical protein, conserved [Leishmania donovani]	174	174	63%	3e-48	32.34%	XP_003861246.1
3 Select seq ref\|XP_024329170.1\|	periodic tryptophan protein 1, putative [Plasmodium falciparum 3D7]	127	127	67%	8e-31	27.32%	XP_024329170.1
4 Select seq ref\|XP_068078310.1\|	katanin p80 WD40 repeat-containing subunit B1 isoform X2 [Danio rerio]	76.3	147	54%	1e-13	30.48%	XP_068078310.1
5 Select seq ref\|XP_063125385.1\|	GATOR2 complex protein WDR24 isoform X1 [Rattus norvegicus]	76.3	76.3	32%	2e-13	33.33%	XP_063125385.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments