Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_612455.1
mitochondrial assembly of ribosomal large subunit protein 1 [Homo sapiens]
...
Query length:
234 aa
DOMAINS: and other(s) domains
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uncharacterized protein Dmel_CG9166, isoform B
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uncharacterized protein Dmel_CG9166, isoform B [Drosophila melanogaster]
241 aa protein
accession:NP_001261254.1
ribosome silencing factor
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ribosome silencing factor [Shewanella]
109 aa protein
accession:WP_011071401.1
ribosome silencing factor
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ribosome silencing factor [Enterobacteriaceae]
105 aa protein
accession:WP_001161664.1
mitochondrial assembly of ribosomal large subunit protein 1
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mitochondrial assembly of ribosomal large subunit protein 1 [Danio rerio]
220 aa protein
accession:NP_001313544.1
Query: mitochondrial assembly of ribosomal large subunit protein 1
...
mitochondrial assembly of ribosomal large subunit protein 1 [Homo sapiens]
234 aa protein
accession:NP_612455.1
mitochondrial assembly of ribosomal large subunit protein 1 isoform X2
...
mitochondrial assembly of ribosomal large subunit protein 1 isoform X2 [Mus musculus]
245 aa protein
accession:XP_006506785.1
DOMAINS: and other(s) domains
...
uncharacterized protein Dmel_CG9166, isoform B [Drosophila melanogaster]
241 aa protein
accession:NP_001261254.1
ribosome silencing factor [Shewanella]
109 aa protein
accession:WP_011071401.1
ribosome silencing factor [Enterobacteriaceae]
105 aa protein
accession:WP_001161664.1
mitochondrial assembly of ribosomal large subunit protein 1 [Danio rerio]
220 aa protein
accession:NP_001313544.1
mitochondrial assembly of ribosomal large subunit protein 1 [Homo sapiens]
234 aa protein
accession:NP_612455.1
mitochondrial assembly of ribosomal large subunit protein 1 isoform X2 [Mus musculus]
245 aa protein
accession:XP_006506785.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 333 | 333 | 100% | 1e-115 | 71.79% | XP_006506785.1 | |
| 2 | 169 | 169 | 58% | 2e-51 | 56.62% | NP_001313544.1 | |
| 3 | 97.4 | 97.4 | 48% | 3e-23 | 40.35% | NP_001261254.1 | |
| 4 | 81.6 | 81.6 | 38% | 1e-18 | 43.33% | WP_011071401.1 | |
| 5 | 70.5 | 70.5 | 43% | 2e-14 | 32.67% | WP_001161664.1 |