Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_649476.1
factor interacting with poly(A) polymerase 1 [Drosophila melanogaster]
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Query length:
701 aa
DOMAINS: and other(s) domains
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uncharacterized protein Dmel_CG42724, isoform C
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uncharacterized protein Dmel_CG42724, isoform C [Drosophila melanogaster]
1123 aa protein
accession:NP_001189184.1
Query: factor interacting with poly(A) polymerase 1
...
factor interacting with poly(A) polymerase 1 [Drosophila melanogaster]
701 aa protein
accession:NP_649476.1
pre-mRNA 3'-end-processing factor FIP1
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pre-mRNA 3'-end-processing factor FIP1 [Danio rerio]
570 aa protein
accession:NP_001006042.1
pre-mRNA 3'-end-processing factor FIP1 isoform 15
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pre-mRNA 3'-end-processing factor FIP1 isoform 15 [Homo sapiens]
570 aa protein
accession:NP_001363684.1
pre-mRNA 3'-end-processing factor FIP1 isoform X12
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pre-mRNA 3'-end-processing factor FIP1 isoform X12 [Rattus norvegicus]
487 aa protein
accession:XP_063128977.1
pre-mRNA 3'-end-processing factor FIP1 isoform X7
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pre-mRNA 3'-end-processing factor FIP1 isoform X7 [Mus musculus]
496 aa protein
accession:XP_036021324.1
DOMAINS: and other(s) domains
...
uncharacterized protein Dmel_CG42724, isoform C [Drosophila melanogaster]
1123 aa protein
accession:NP_001189184.1
factor interacting with poly(A) polymerase 1 [Drosophila melanogaster]
701 aa protein
accession:NP_649476.1
pre-mRNA 3'-end-processing factor FIP1 [Danio rerio]
570 aa protein
accession:NP_001006042.1
pre-mRNA 3'-end-processing factor FIP1 isoform 15 [Homo sapiens]
570 aa protein
accession:NP_001363684.1
pre-mRNA 3'-end-processing factor FIP1 isoform X12 [Rattus norvegicus]
487 aa protein
accession:XP_063128977.1
pre-mRNA 3'-end-processing factor FIP1 isoform X7 [Mus musculus]
496 aa protein
accession:XP_036021324.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 134 | 216 | 14% | 4e-31 | 86.30% | NP_001189184.1 | |
| 2 | 110 | 110 | 17% | 6e-24 | 46.77% | NP_001006042.1 | |
| 3 | 109 | 109 | 17% | 1e-23 | 44.00% | NP_001363684.1 | |
| 4 | 108 | 108 | 17% | 3e-23 | 43.94% | XP_063128977.1 | |
| 5 | 107 | 107 | 17% | 3e-23 | 43.94% | XP_036021324.1 |