Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_649484.3 nuclease slx1 [Drosophila melanogaster] ... Query length: 297 aa

Structure-specific endonuclease subunit SLX1 homolog ...

Structure-specific endonuclease subunit SLX1 homolog [Caenorhabditis elegans]

443 aa protein

accession:NP_491541.1

Alignment Sequence Identical proteins

Query: nuclease slx1 ...

nuclease slx1 [Drosophila melanogaster]

297 aa protein

accession:NP_649484.3

Sequence Identical proteins

structure-specific endonuclease subunit SLX1 ...

structure-specific endonuclease subunit SLX1 [Danio rerio]

260 aa protein

accession:NP_001314786.1

Alignment Sequence Identical proteins

structure-specific endonuclease subunit SLX1 ...

structure-specific endonuclease subunit SLX1 [Rattus norvegicus]

271 aa protein

accession:NP_001009292.1

Alignment Sequence Identical proteins

structure-specific endonuclease subunit SLX1 ...

structure-specific endonuclease subunit SLX1 [Mus musculus]

270 aa protein

accession:NP_083696.2

Alignment Sequence Identical proteins

structure-specific endonuclease subunit SLX1 isoform 1 ...

structure-specific endonuclease subunit SLX1 isoform 1 [Homo sapiens]

275 aa protein

accession:NP_001014999.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001314786.1\|	structure-specific endonuclease subunit SLX1 [Danio rerio]	202	202	80%	5e-63	41.74%	NP_001314786.1
2 Select seq ref\|NP_001009292.1\|	structure-specific endonuclease subunit SLX1 [Rattus norvegicus]	201	201	81%	3e-62	44.53%	NP_001009292.1
3 Select seq ref\|NP_083696.2\|	structure-specific endonuclease subunit SLX1 [Mus musculus]	201	201	82%	4e-62	43.37%	NP_083696.2
4 Select seq ref\|NP_001014999.1\|	structure-specific endonuclease subunit SLX1 isoform 1 [Homo sapiens]	192	192	81%	1e-58	44.35%	NP_001014999.1
5 Select seq ref\|NP_491541.1\|	Structure-specific endonuclease subunit SLX1 homolog [Caenorhabditis elegans]	164	164	86%	3e-46	36.70%	NP_491541.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments