Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_650002.1 uncharacterized protein Dmel_CG6345 [Drosophila melanogaster] ... Query length: 583 aa

CDK5RAP1-like protein ...

CDK5RAP1-like protein [Caenorhabditis elegans]

547 aa protein

accession:NP_498290.1

Alignment Sequence Identical proteins

Query: uncharacterized protein Dmel_CG6345 ...

uncharacterized protein Dmel_CG6345 [Drosophila melanogaster]

583 aa protein

accession:NP_650002.1

Sequence Identical proteins

mitochondrial tRNA methylthiotransferase CDK5RAP1 isoform a ...

mitochondrial tRNA methylthiotransferase CDK5RAP1 isoform a [Homo sapiens]

587 aa protein

accession:NP_057492.2

Alignment Sequence Identical proteins

mitochondrial tRNA methylthiotransferase CDK5RAP1 ...

mitochondrial tRNA methylthiotransferase CDK5RAP1 [Rattus norvegicus]

586 aa protein

accession:NP_663773.1

Alignment Sequence Identical proteins

mitochondrial tRNA methylthiotransferase CDK5RAP1 ...

mitochondrial tRNA methylthiotransferase CDK5RAP1 [Mus musculus]

588 aa protein

accession:NP_080152.1

Alignment Sequence Identical proteins

mitochondrial tRNA methylthiotransferase CDK5RAP1 ...

mitochondrial tRNA methylthiotransferase CDK5RAP1 [Danio rerio]

577 aa protein

accession:NP_001103849.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_057492.2\|	mitochondrial tRNA methylthiotransferase CDK5RAP1 isoform a [Homo sapiens]	607	607	92%	0.0	55.56%	NP_057492.2
2 Select seq ref\|NP_663773.1\|	mitochondrial tRNA methylthiotransferase CDK5RAP1 [Rattus norvegicus]	598	598	93%	0.0	54.93%	NP_663773.1
3 Select seq ref\|NP_080152.1\|	mitochondrial tRNA methylthiotransferase CDK5RAP1 [Mus musculus]	595	595	94%	0.0	53.79%	NP_080152.1
4 Select seq ref\|NP_001103849.1\|	mitochondrial tRNA methylthiotransferase CDK5RAP1 [Danio rerio]	591	591	92%	0.0	53.38%	NP_001103849.1
5 Select seq ref\|NP_498290.1\|	CDK5RAP1-like protein [Caenorhabditis elegans]	523	523	85%	3e-180	51.20%	NP_498290.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments