Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_651883.1 cleavage stimulation factor 50 kD subunit [Drosophila melanogaster] ... Query length: 424 aa

cleavage stimulation factor subunit 50 ...

cleavage stimulation factor subunit 50 [Glycine max]

425 aa protein

accession:XP_003528235.1

Alignment Sequence Identical proteins

cleavage stimulation factor subunit 1 ...

cleavage stimulation factor subunit 1 [Rattus norvegicus]

431 aa protein

accession:NP_001013179.1

Alignment Sequence Identical proteins

cleavage stimulation factor subunit 1 ...

cleavage stimulation factor subunit 1 [Homo sapiens]

431 aa protein

accession:NP_001028693.1

Alignment Sequence Identical proteins

cleavage stimulation factor subunit 1 ...

cleavage stimulation factor subunit 1 [Danio rerio]

431 aa protein

accession:NP_001315488.1

Alignment Sequence Identical proteins

Query: cleavage stimulation factor 50 kD subunit ...

cleavage stimulation factor 50 kD subunit [Drosophila melanogaster]

424 aa protein

accession:NP_651883.1

Sequence Identical proteins

Cleavage stimulation factor 50 kDa subunit ...

Cleavage stimulation factor 50 kDa subunit [Caenorhabditis elegans]

430 aa protein

accession:NP_495822.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001013179.1\|	cleavage stimulation factor subunit 1 [Rattus norvegicus]	468	468	96%	1e-162	55.11%	NP_001013179.1
2 Select seq ref\|NP_001028693.1\|	cleavage stimulation factor subunit 1 [Homo sapiens]	464	464	96%	2e-161	55.11%	NP_001028693.1
3 Select seq ref\|NP_001315488.1\|	cleavage stimulation factor subunit 1 [Danio rerio]	449	449	98%	4e-155	53.16%	NP_001315488.1
4 Select seq ref\|NP_495822.1\|	Cleavage stimulation factor 50 kDa subunit [Caenorhabditis elegans]	423	423	96%	4e-145	49.05%	NP_495822.1
5 Select seq ref\|XP_003528235.1\|	cleavage stimulation factor subunit 50 [Glycine max]	258	258	94%	8e-81	34.70%	XP_003528235.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments