Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_666113.2 huntingtin-interacting protein 1 isoform 1 [Mus musculus] ... Query length: 1029 aa

clathrin adaptor End4 ...

clathrin adaptor End4 [Schizosaccharomyces pombe]

1102 aa protein

accession:NP_594069.2

Alignment Sequence Identical proteins

Huntington interacting protein related 1 ...

Huntington interacting protein related 1 [Caenorhabditis elegans]

921 aa protein

accession:NP_001379566.1

Alignment Sequence Identical proteins

huntingtin-interacting protein 1 ...

huntingtin-interacting protein 1 [Danio rerio]

1046 aa protein

accession:NP_001159677.1

Alignment Sequence Identical proteins

huntingtin-interacting protein 1 isoform X4 ...

huntingtin-interacting protein 1 isoform X4 [Homo sapiens]

1003 aa protein

accession:XP_047276251.1

Alignment Sequence Identical proteins

Query: huntingtin-interacting protein 1 isoform 1 ...

huntingtin-interacting protein 1 isoform 1 [Mus musculus]

1029 aa protein

accession:NP_666113.2

Sequence Identical proteins

huntingtin-interacting protein 1 isoform 2 ...

huntingtin-interacting protein 1 isoform 2 [Rattus norvegicus]

1038 aa protein

accession:NP_001402685.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001402685.1\|	huntingtin-interacting protein 1 isoform 2 [Rattus norvegicus]	2036	2036	100%	0.0	95.28%	NP_001402685.1
2 Select seq ref\|XP_047276251.1\|	huntingtin-interacting protein 1 isoform X4 [Homo sapiens]	1810	1810	96%	0.0	87.66%	XP_047276251.1
3 Select seq ref\|NP_001159677.1\|	huntingtin-interacting protein 1 [Danio rerio]	1382	1382	97%	0.0	66.73%	NP_001159677.1
4 Select seq ref\|NP_001379566.1\|	Huntington interacting protein related 1 [Caenorhabditis elegans]	297	533	77%	3e-85	32.81%	NP_001379566.1
5 Select seq ref\|NP_594069.2\|	clathrin adaptor End4 [Schizosaccharomyces pombe]	170	298	48%	4e-42	39.26%	NP_594069.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments