Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_729294.2 clock, isoform G [Drosophila melanogaster] ... Query length: 895 aa

circadian locomoter output cycles protein kaput isoform X6 ...

circadian locomoter output cycles protein kaput isoform X6 [Rattus norvegicus]

739 aa protein

accession:XP_038948315.1

Alignment Sequence Identical proteins

circadian locomoter output cycles protein kaput isoform X5 ...

circadian locomoter output cycles protein kaput isoform X5 [Mus musculus]

730 aa protein

accession:XP_011247704.1

Alignment Sequence Identical proteins

clock circadian regulator b ...

clock circadian regulator b [Danio rerio]

820 aa protein

accession:NP_840080.2

Alignment Sequence Identical proteins

neuronal PAS domain-containing protein 2 isoform X11 ...

neuronal PAS domain-containing protein 2 isoform X11 [Homo sapiens]

700 aa protein

accession:XP_005264018.1

Alignment Sequence Identical proteins

Query: clock, isoform G ...

clock, isoform G [Drosophila melanogaster]

895 aa protein

accession:NP_729294.2

Sequence Identical proteins

clock, isoform A ...

clock, isoform A [Drosophila melanogaster]

1023 aa protein

accession:NP_523964.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_523964.2\|	clock, isoform A [Drosophila melanogaster]	1824	1824	100%	0.0	100.00%	NP_523964.2
2 Select seq ref\|XP_038948315.1\|	circadian locomoter output cycles protein kaput isoform X6 [Rattus norvegicus]	276	276	24%	3e-79	54.17%	XP_038948315.1
3 Select seq ref\|XP_011247704.1\|	circadian locomoter output cycles protein kaput isoform X5 [Mus musculus]	274	274	24%	1e-78	53.95%	XP_011247704.1
4 Select seq ref\|XP_005264018.1\|	neuronal PAS domain-containing protein 2 isoform X11 [Homo sapiens]	272	272	25%	3e-78	50.21%	XP_005264018.1
5 Select seq ref\|NP_840080.2\|	clock circadian regulator b [Danio rerio]	274	274	25%	4e-78	54.22%	NP_840080.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments