Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_741318.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
...
Query length:
296 aa
DOMAINS: and other(s) domains
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collagen alpha-3(VI) chain isoform X3
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collagen alpha-3(VI) chain isoform X3 [Danio rerio]
12763 aa protein
accession:XP_068074648.1
collagen alpha-5(VI) chain isoform X3
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collagen alpha-5(VI) chain isoform X3 [Rattus norvegicus]
2635 aa protein
accession:XP_008764816.2
collagen alpha-5(VI) chain isoform 1 precursor
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collagen alpha-5(VI) chain isoform 1 precursor [Homo sapiens]
2614 aa protein
accession:NP_001265227.1
Query: Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
296 aa protein
accession:NP_741318.1
Cuticle collagen dpy-5
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Cuticle collagen dpy-5 [Caenorhabditis elegans]
284 aa protein
accession:NP_491595.1
Nematode cuticle collagen N-terminal domain-containing protein
...
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
294 aa protein
accession:NP_872105.1
DOMAINS: and other(s) domains
...
collagen alpha-3(VI) chain isoform X3 [Danio rerio]
12763 aa protein
accession:XP_068074648.1
collagen alpha-5(VI) chain isoform X3 [Rattus norvegicus]
2635 aa protein
accession:XP_008764816.2
collagen alpha-5(VI) chain isoform 1 precursor [Homo sapiens]
2614 aa protein
accession:NP_001265227.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
296 aa protein
accession:NP_741318.1
Cuticle collagen dpy-5 [Caenorhabditis elegans]
284 aa protein
accession:NP_491595.1
Nematode cuticle collagen N-terminal domain-containing protein [Caenorhabditis elegans]
294 aa protein
accession:NP_872105.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 176 | 176 | 91% | 2e-52 | 45.85% | NP_491595.1 | |
| 2 | 118 | 363 | 64% | 4e-28 | 40.84% | XP_008764816.2 | |
| 3 | 115 | 407 | 68% | 3e-27 | 39.02% | NP_001265227.1 | |
| 4 | 97.1 | 566 | 64% | 7e-21 | 34.48% | XP_068074648.1 | |
| 5 | 145 | 145 | 92% | 3e-40 | 43.39% | NP_872105.1 |