Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_741580.1
Serotonin-gated chloride channel mod-1 [Caenorhabditis elegans]
...
Query length:
489 aa
DOMAINS: and other(s) domains
...
gamma-aminobutyric acid receptor subunit beta-1 isoform 2
...
gamma-aminobutyric acid receptor subunit beta-1 isoform 2 [Mus musculus]
441 aa protein
accession:NP_001357897.1
gamma-aminobutyric acid receptor subunit beta-1 isoform X2
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gamma-aminobutyric acid receptor subunit beta-1 isoform X2 [Homo sapiens]
441 aa protein
accession:XP_024309744.1
gamma-aminobutyric acid receptor subunit beta-3 isoform X1
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gamma-aminobutyric acid receptor subunit beta-3 isoform X1 [Rattus norvegicus]
473 aa protein
accession:XP_038957050.1
gamma-aminobutyric acid receptor subunit beta-3 isoform X3
...
gamma-aminobutyric acid receptor subunit beta-3 isoform X3 [Danio rerio]
498 aa protein
accession:XP_005166138.1
Query: Serotonin-gated chloride channel mod-1
...
Serotonin-gated chloride channel mod-1 [Caenorhabditis elegans]
489 aa protein
accession:NP_741580.1
Serotonin-gated chloride channel mod-1
...
Serotonin-gated chloride channel mod-1 [Caenorhabditis elegans]
475 aa protein
accession:NP_001024034.1
DOMAINS: and other(s) domains
...
gamma-aminobutyric acid receptor subunit beta-1 isoform 2 [Mus musculus]
441 aa protein
accession:NP_001357897.1
gamma-aminobutyric acid receptor subunit beta-1 isoform X2 [Homo sapiens]
441 aa protein
accession:XP_024309744.1
gamma-aminobutyric acid receptor subunit beta-3 isoform X1 [Rattus norvegicus]
473 aa protein
accession:XP_038957050.1
gamma-aminobutyric acid receptor subunit beta-3 isoform X3 [Danio rerio]
498 aa protein
accession:XP_005166138.1
Serotonin-gated chloride channel mod-1 [Caenorhabditis elegans]
489 aa protein
accession:NP_741580.1
Serotonin-gated chloride channel mod-1 [Caenorhabditis elegans]
475 aa protein
accession:NP_001024034.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 991 | 991 | 100% | 0.0 | 97.14% | NP_001024034.1 | |
| 2 | 223 | 223 | 86% | 4e-66 | 29.26% | NP_001357897.1 | |
| 3 | 223 | 223 | 88% | 8e-66 | 28.54% | XP_005166138.1 | |
| 4 | 219 | 219 | 86% | 9e-65 | 29.68% | XP_024309744.1 | |
| 5 | 216 | 216 | 87% | 2e-63 | 28.34% | XP_038957050.1 |