Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_788084.1
Tif-IA [Drosophila melanogaster]
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Query length:
611 aa
DOMAINS: and other(s) domains
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RNA polymerase I-specific transcription initiation factor tif-1A
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RNA polymerase I-specific transcription initiation factor tif-1A [Caenorhabditis elegans]
654 aa protein
accession:NP_001379058.1
Query: Tif-IA
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RNA polymerase I-specific transcription initiation factor RRN3
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RNA polymerase I-specific transcription initiation factor RRN3 [Danio rerio]
612 aa protein
accession:XP_005164166.1
RNA polymerase I-specific transcription initiation factor RRN3 isoform 1
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RNA polymerase I-specific transcription initiation factor RRN3 isoform 1 [Homo sapiens]
651 aa protein
accession:NP_060897.3
RNA polymerase I-specific transcription initiation factor RRN3
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RNA polymerase I-specific transcription initiation factor RRN3 [Mus musculus]
656 aa protein
accession:NP_001034610.1
RNA polymerase I-specific transcription initiation factor RRN3 isoform X1
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RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 [Rattus norvegicus]
656 aa protein
accession:XP_008765680.1
DOMAINS: and other(s) domains
...
RNA polymerase I-specific transcription initiation factor tif-1A [Caenorhabditis elegans]
654 aa protein
accession:NP_001379058.1
RNA polymerase I-specific transcription initiation factor RRN3 [Danio rerio]
612 aa protein
accession:XP_005164166.1
RNA polymerase I-specific transcription initiation factor RRN3 isoform 1 [Homo sapiens]
651 aa protein
accession:NP_060897.3
RNA polymerase I-specific transcription initiation factor RRN3 [Mus musculus]
656 aa protein
accession:NP_001034610.1
RNA polymerase I-specific transcription initiation factor RRN3 isoform X1 [Rattus norvegicus]
656 aa protein
accession:XP_008765680.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 291 | 291 | 92% | 5e-89 | 32.59% | XP_005164166.1 | |
| 2 | 273 | 273 | 88% | 2e-81 | 31.55% | NP_060897.3 | |
| 3 | 270 | 270 | 84% | 2e-80 | 32.90% | NP_001034610.1 | |
| 4 | 259 | 259 | 93% | 3e-76 | 30.35% | XP_008765680.1 | |
| 5 | 150 | 150 | 73% | 4e-37 | 26.54% | NP_001379058.1 |