Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_849254.2 SR-related and CTD-associated factor 4 isoform 1 [Mus musculus] ... Query length: 1209 aa

CID domain-containing protein ...

CID domain-containing protein [Caenorhabditis elegans]

988 aa protein

accession:NP_491403.1

Alignment Sequence Identical proteins

insulator su(Hw) mRNA adaptor, isoform C ...

insulator su(Hw) mRNA adaptor, isoform C [Drosophila melanogaster]

412 aa protein

accession:NP_001261119.1

Alignment Sequence Identical proteins

SR-related and CTD-associated factor 4 [Danio rerio]

1070 aa protein

accession:XP_695887.5

Alignment Sequence Identical proteins

SR-related and CTD-associated factor 4 isoform X3 [Homo sapiens]

1088 aa protein

accession:XP_005261074.1

Alignment Sequence Identical proteins

SR-related and CTD-associated factor 4 isoform 1 [Mus musculus]

1209 aa protein

accession:NP_849254.2

Sequence Identical proteins

SR-related and CTD-associated factor 4 isoform 4 [Mus musculus]

1210 aa protein

accession:NP_001404016.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001404016.1\|	SR-related and CTD-associated factor 4 isoform 4 [Mus musculus]	2402	2402	100%	0.0	99.92%	NP_001404016.1
2 Select seq ref\|XP_005261074.1\|	SR-related and CTD-associated factor 4 isoform X3 [Homo sapiens]	863	1367	95%	0.0	89.91%	XP_005261074.1
3 Select seq ref\|XP_695887.5\|	SR-related and CTD-associated factor 4 [Danio rerio]	352	699	66%	3e-102	50.90%	XP_695887.5
4 Select seq ref\|NP_001261119.1\|	insulator su(Hw) mRNA adaptor, isoform C [Drosophila melanogaster]	214	214	11%	2e-59	71.11%	NP_001261119.1
5 Select seq ref\|NP_491403.1\|	CID domain-containing protein [Caenorhabditis elegans]	128	211	22%	1e-28	50.36%	NP_491403.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments