Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
NP_849509.1
U2 snRNP auxilliary factor, large subunit, splicing factor [Arabidopsis thaliana]
...
Query length:
542 aa
DOMAINS: and other(s) domains
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U2 small nuclear RNA auxiliary factor 2b isoform X3
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U2 small nuclear RNA auxiliary factor 2b isoform X3 [Danio rerio]
473 aa protein
accession:XP_009292308.1
splicing factor U2AF 65 kDa subunit isoform a
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splicing factor U2AF 65 kDa subunit isoform a [Homo sapiens]
475 aa protein
accession:NP_009210.1
U2 small nuclear riboprotein auxiliary factor 50, isoform C
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U2 small nuclear riboprotein auxiliary factor 50, isoform C [Drosophila melanogaster]
360 aa protein
accession:NP_001245709.1
splicing factor U2af large subunit A isoform X2
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splicing factor U2af large subunit A isoform X2 [Glycine max]
598 aa protein
accession:XP_014630490.1
Query: U2 snRNP auxilliary factor, large subunit, splicing factor
...
U2 snRNP auxilliary factor, large subunit, splicing factor [Arabidopsis thaliana]
542 aa protein
accession:NP_849509.1
U2 snRNP auxilliary factor, large subunit, splicing factor
...
U2 snRNP auxilliary factor, large subunit, splicing factor [Arabidopsis thaliana]
565 aa protein
accession:NP_974695.1
DOMAINS: and other(s) domains
...
U2 small nuclear RNA auxiliary factor 2b isoform X3 [Danio rerio]
473 aa protein
accession:XP_009292308.1
splicing factor U2AF 65 kDa subunit isoform a [Homo sapiens]
475 aa protein
accession:NP_009210.1
U2 small nuclear riboprotein auxiliary factor 50, isoform C [Drosophila melanogaster]
360 aa protein
accession:NP_001245709.1
splicing factor U2af large subunit A isoform X2 [Glycine max]
598 aa protein
accession:XP_014630490.1
U2 snRNP auxilliary factor, large subunit, splicing factor [Arabidopsis thaliana]
542 aa protein
accession:NP_849509.1
U2 snRNP auxilliary factor, large subunit, splicing factor [Arabidopsis thaliana]
565 aa protein
accession:NP_974695.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1034 | 1034 | 100% | 0.0 | 92.32% | NP_974695.1 | |
| 2 | 575 | 575 | 61% | 0.0 | 80.47% | XP_014630490.1 | |
| 3 | 232 | 232 | 68% | 1e-68 | 38.90% | XP_009292308.1 | |
| 4 | 212 | 212 | 50% | 3e-62 | 42.46% | NP_001245709.1 | |
| 5 | 211 | 211 | 63% | 8e-61 | 39.72% | NP_009210.1 |