Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_878910.1 C-type lectin domain family 10 member A isoform 1 [Homo sapiens] ... Query length: 316 aa

versican core protein isoform X1 ...

versican core protein isoform X1 [Mus musculus]

2070 aa protein

accession:XP_011242773.2

Alignment Sequence Identical proteins

C-type lectin domain family 4 member M isoform 7 ...

C-type lectin domain family 4 member M isoform 7 [Homo sapiens]

343 aa protein

accession:NP_001403299.1

Alignment Sequence Identical proteins

C-type lectin domain family 4 member G isoform X3 ...

C-type lectin domain family 4 member G isoform X3 [Rattus norvegicus]

214 aa protein

accession:XP_063127797.1

Alignment Sequence Identical proteins

Query: C-type lectin domain family 10 member A isoform 1 ...

C-type lectin domain family 10 member A isoform 1 [Homo sapiens]

316 aa protein

accession:NP_878910.1

Sequence Identical proteins

asialoglycoprotein receptor 1 ...

asialoglycoprotein receptor 1 [Danio rerio]

299 aa protein

accession:XP_005170656.1

Alignment Sequence Identical proteins

C-type lectin domain family 10 member A isoform X1 ...

C-type lectin domain family 10 member A isoform X1 [Danio rerio]

521 aa protein

accession:XP_021327239.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_005170656.1\|	asialoglycoprotein receptor 1 [Danio rerio]	157	157	80%	7e-45	33.07%	XP_005170656.1
2 Select seq ref\|NP_001403299.1\|	C-type lectin domain family 4 member M isoform 7 [Homo sapiens]	105	105	57%	3e-25	33.33%	NP_001403299.1
3 Select seq ref\|XP_011242773.2\|	versican core protein isoform X1 [Mus musculus]	94.0	94.0	40%	3e-20	38.64%	XP_011242773.2
4 Select seq ref\|XP_063127797.1\|	C-type lectin domain family 4 member G isoform X3 [Rattus norvegicus]	84.3	84.3	66%	3e-18	29.03%	XP_063127797.1
5 Select seq ref\|XP_021327239.1\|	C-type lectin domain family 10 member A isoform X1 [Danio rerio]	113	113	39%	5e-27	39.06%	XP_021327239.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments