Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: NP_950238.1 sodium channel subunit beta-1 isoform b precursor [Homo sapiens] ... Query length: 268 aa

sodium channel, voltage-gated, type I, beta a isoform X1 ...

sodium channel, voltage-gated, type I, beta a isoform X1 [Danio rerio]

209 aa protein

accession:XP_005158268.1

Alignment Sequence Identical proteins

sodium channel subunit beta-1 isoform 1 precursor ...

sodium channel subunit beta-1 isoform 1 precursor [Mus musculus]

218 aa protein

accession:NP_035452.1

Alignment Sequence Identical proteins

sodium channel subunit beta-1 isoform 2 ...

sodium channel subunit beta-1 isoform 2 [Mus musculus]

185 aa protein

accession:NP_001389263.1

Alignment Sequence Identical proteins

sodium channel subunit beta-1 isoform c ...

sodium channel subunit beta-1 isoform c [Homo sapiens]

185 aa protein

accession:NP_001308534.1

Alignment Sequence Identical proteins

Query: sodium channel subunit beta-1 isoform b precursor ...

sodium channel subunit beta-1 isoform b precursor [Homo sapiens]

268 aa protein

accession:NP_950238.1

Sequence Identical proteins

sodium channel subunit beta-1 isoform a precursor ...

sodium channel subunit beta-1 isoform a precursor [Homo sapiens]

218 aa protein

accession:NP_001028.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001028.1\|	sodium channel subunit beta-1 isoform a precursor [Homo sapiens]	313	313	57%	3e-107	96.77%	NP_001028.1
2 Select seq ref\|NP_035452.1\|	sodium channel subunit beta-1 isoform 1 precursor [Mus musculus]	298	298	57%	8e-102	92.90%	NP_035452.1
3 Select seq ref\|XP_005158268.1\|	sodium channel, voltage-gated, type I, beta a isoform X1 [Danio rerio]	132	132	51%	1e-36	48.91%	XP_005158268.1
4 Select seq ref\|NP_001308534.1\|	sodium channel subunit beta-1 isoform c [Homo sapiens]	249	249	45%	1e-82	95.90%	NP_001308534.1
5 Select seq ref\|NP_001389263.1\|	sodium channel subunit beta-1 isoform 2 [Mus musculus]	242	242	45%	4e-80	93.44%	NP_001389263.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments