Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
OQX88722.1
hypothetical protein B6D60_01365 [candidate division KSB1 bacterium 4484_87]
...
Query length:
272 aa
DOMAINS: and other(s) domains
...
RNA polymerase II-associated Paf1 complex subunit Tpr1
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RNA polymerase II-associated Paf1 complex subunit Tpr1 [Schizosaccharomyces pombe]
1039 aa protein
accession:NP_594620.1
Ctr9p
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Ctr9p [Saccharomyces cerevisiae S288C]
1077 aa protein
accession:NP_014496.2
Query: hypothetical protein B6D60_01365
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hypothetical protein B6D60_01365 [candidate division KSB1 bacterium 4484_87]
272 aa protein
accession:OQX88722.1
intraflagellar transport protein 88 homolog isoform X24
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intraflagellar transport protein 88 homolog isoform X24 [Homo sapiens]
371 aa protein
accession:XP_047286634.1
intraflagellar transport protein 88 homolog isoform X3
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intraflagellar transport protein 88 homolog isoform X3 [Danio rerio]
854 aa protein
accession:XP_068079388.1
intraflagellar transport protein IFT88, putative
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intraflagellar transport protein IFT88, putative [Leishmania donovani]
811 aa protein
accession:XP_003861956.1
DOMAINS: and other(s) domains
...
RNA polymerase II-associated Paf1 complex subunit Tpr1 [Schizosaccharomyces pombe]
1039 aa protein
accession:NP_594620.1
Ctr9p [Saccharomyces cerevisiae S288C]
1077 aa protein
accession:NP_014496.2
hypothetical protein B6D60_01365 [candidate division KSB1 bacterium 4484_87]
272 aa protein
accession:OQX88722.1
intraflagellar transport protein 88 homolog isoform X24 [Homo sapiens]
371 aa protein
accession:XP_047286634.1
intraflagellar transport protein 88 homolog isoform X3 [Danio rerio]
854 aa protein
accession:XP_068079388.1
intraflagellar transport protein IFT88, putative [Leishmania donovani]
811 aa protein
accession:XP_003861956.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 46.6 | 46.6 | 31% | 2e-04 | 31.87% | XP_047286634.1 | |
| 2 | 43.1 | 43.1 | 31% | 0.003 | 29.67% | XP_068079388.1 | |
| 3 | 40.4 | 40.4 | 32% | 0.017 | 28.09% | NP_594620.1 | |
| 4 | 38.5 | 38.5 | 31% | 0.081 | 29.67% | XP_003861956.1 | |
| 5 | 36.6 | 36.6 | 30% | 0.29 | 28.05% | NP_014496.2 |