Report description

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: P03366.3 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; AltName: Full=Exoribonuclease H; AltName: Full=p66 RT; Contains: RecName: Full=p51 RT; Contains: RecName: Full=p15; Contains: RecName: Full=Integrase; Short=IN [Human immunodeficiency virus type 1 BH10] ... Query length: 1447 aa
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
uncharacterized protein Gm42427 ...
uncharacterized protein Gm42427 [Mus musculus]
564 aa protein
accession:XP_030110853.2
uncharacterized protein LOC134484818 ...
uncharacterized protein LOC134484818 [Rattus norvegicus]
1147 aa protein
accession:XP_063136784.1
uncharacterized protein LOC134479743 ...
uncharacterized protein LOC134479743 [Rattus norvegicus]
1143 aa protein
accession:XP_063120511.1
Query: RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; AltName: Full=Exoribonuclease H; AltName: Full=p66 RT; Contains: RecName: Full=p51 RT; Contains: RecName: Full=p15; Contains: RecName: Full=Integrase; Short=IN ...
RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; AltName: Full=Exoribonuclease H; AltName: Full=p66 RT; Contains: RecName: Full=p51 RT; Contains: RecName: Full=p15; Contains: RecName: Full=Integrase; Short=IN [Human immunodeficiency virus type 1 BH10]
1447 aa protein
accession:P03366.3
uncharacterized protein LOC134480128 ...
uncharacterized protein LOC134480128 [Rattus norvegicus]
1207 aa protein
accession:XP_063122429.1

Descriptions

Best hits

Select:AllNone Selected:0
Alignments Download
GenPept Show/hide columns of the table presenting best hits
Available columns







Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
uncharacterized protein LOC134484818 [Rattus norvegicus]
105 156 31% 1e-2125.32% XP_063136784.1
2
uncharacterized protein Gm42427 [Mus musculus]
90.9 90.9 14% 2e-1728.17% XP_030110853.2
3
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
83.6 83.6 10% 5e-1531.95% XP_047305371.1
4
uncharacterized protein LOC134480128 [Rattus norvegicus]
105 156 31% 1e-2125.32% XP_063122429.1
5
uncharacterized protein LOC134479743 [Rattus norvegicus]
104 155 31% 2e-2125.32% XP_063120511.1