Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P03373.2
RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p19; Contains: RecName: Full=p2A; Contains: RecName: Full=p2B; Contains: RecName: Full=p10; Contains: RecName: Full=V-erbA oncogene [Avian erythroblastosis virus (strain ES4)]
...
Query length:
555 aa
DOMAINS: and other(s) domains
...
thyroid hormone receptor alpha isoform 2
...
thyroid hormone receptor alpha isoform 2 [Mus musculus]
410 aa protein
accession:NP_835161.1
thyroid hormone receptor alpha isoform 1
...
thyroid hormone receptor alpha isoform 1 [Homo sapiens]
410 aa protein
accession:NP_955366.1
Query: RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p19; Contains: RecName: Full=p2A; Contains: RecName: Full=p2B; Contains: RecName: Full=p10; Contains: RecName: Full=V-erbA oncogene
...
RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p19; Contains: RecName: Full=p2A; Contains: RecName: Full=p2B; Contains: RecName: Full=p10; Contains: RecName: Full=V-erbA oncogene [Avian erythroblastosis virus (strain ES4)]
555 aa protein
accession:P03373.2
thyroid hormone receptor alpha isoform X3
...
thyroid hormone receptor alpha isoform X3 [Danio rerio]
409 aa protein
accession:XP_001921013.4
thyroid hormone receptor alpha isoform X1
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thyroid hormone receptor alpha isoform X1 [Danio rerio]
419 aa protein
accession:XP_009304995.1
thyroid hormone receptor alpha isoform X2
...
thyroid hormone receptor alpha isoform X2 [Danio rerio]
411 aa protein
accession:XP_009304997.1
DOMAINS: and other(s) domains
...
thyroid hormone receptor alpha isoform 2 [Mus musculus]
410 aa protein
accession:NP_835161.1
thyroid hormone receptor alpha isoform 1 [Homo sapiens]
410 aa protein
accession:NP_955366.1
RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p19; Contains: RecName: Full=p2A; Contains: RecName: Full=p2B; Contains: RecName: Full=p10; Contains: RecName: Full=V-erbA oncogene [Avian erythroblastosis virus (strain ES4)]
555 aa protein
accession:P03373.2
thyroid hormone receptor alpha isoform X3 [Danio rerio]
409 aa protein
accession:XP_001921013.4
thyroid hormone receptor alpha isoform X1 [Danio rerio]
419 aa protein
accession:XP_009304995.1
thyroid hormone receptor alpha isoform X2 [Danio rerio]
411 aa protein
accession:XP_009304997.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 711 | 711 | 69% | 0.0 | 88.80% | NP_835161.1 | |
| 2 | 710 | 710 | 69% | 0.0 | 88.28% | NP_955366.1 | |
| 3 | 706 | 706 | 69% | 0.0 | 88.57% | XP_001921013.4 | |
| 4 | 698 | 698 | 69% | 0.0 | 86.55% | XP_009304995.1 | |
| 5 | 695 | 695 | 68% | 0.0 | 87.15% | XP_009304997.1 |