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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: P04590.3 RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag [Human immunodeficiency virus type 2 (ISOLATE ROD)] ... Query length: 522 aa
Query: RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag ...
RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag [Human immunodeficiency virus type 2 (ISOLATE ROD)]
522 aa protein
accession:P04590.3
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
endogenous retrovirus group K member 5 Gag polyprotein isoform X1 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X1 [Homo sapiens]
738 aa protein
accession:XP_047305367.1
endogenous retrovirus group K member 5 Gag polyprotein-like ...
endogenous retrovirus group K member 5 Gag polyprotein-like [Homo sapiens]
623 aa protein
accession:XP_047297646.1
igE-binding protein-like ...
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
CCHC-type zinc finger, nucleic acid binding protein b ...
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
161 aa protein
accession:NP_001313334.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
75.9 75.9 27% 5e-1330.91% XP_047305371.1
2
igE-binding protein-like [Mus musculus]
64.7 64.7 34% 1e-0926.64% XP_036016771.1
3
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
49.3 140 7% 1e-0543.18% NP_001313334.1
4
endogenous retrovirus group K member 5 Gag polyprotein isoform X1 [Homo sapiens]
75.5 75.5 27% 5e-1330.91% XP_047305367.1
5
endogenous retrovirus group K member 5 Gag polyprotein-like [Homo sapiens]
72.4 72.4 23% 5e-1233.59% XP_047297646.1