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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: P05887.3 RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag [Human immunodeficiency virus type 1 (CDC-451 ISOLATE)] ... Query length: 500 aa
Query: RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag ...
RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag [Human immunodeficiency virus type 1 (CDC-451 ISOLATE)]
500 aa protein
accession:P05887.3
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
igE-binding protein-like ...
igE-binding protein-like [Mus musculus]
601 aa protein
accession:XP_036016762.1
CCHC-type zinc finger, nucleic acid binding protein b ...
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
161 aa protein
accession:NP_001313334.1
cold shock domain protein 1 ...
cold shock domain protein 1 [Arabidopsis thaliana]
265 aa protein
accession:NP_001329650.1
mRNA-binding translational activator GIS2 ...
mRNA-binding translational activator GIS2 [Saccharomyces cerevisiae S288C]
153 aa protein
accession:NP_014144.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
87.4 87.4 42% 9e-1729.91% XP_047305371.1
2
igE-binding protein-like [Mus musculus]
73.6 73.6 31% 2e-1232.12% XP_036016762.1
3
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
55.8 188 19% 7e-0833.33% NP_001313334.1
4
mRNA-binding translational activator GIS2 [Saccharomyces cerevisiae S288C]
51.2 180 18% 2e-0637.50% NP_014144.1
5
cold shock domain protein 1 [Arabidopsis thaliana]
53.1 137 20% 2e-0633.02% NP_001329650.1