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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: P05960.3 RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin [Human immunodeficiency virus type 1 (CDC-451 ISOLATE)] ... Query length: 550 aa
Query: RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin ...
RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160Gag-Pol; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Short=TF; Contains: RecName: Full=p6-pol; Short=p6*; Contains: RecName: Full=Protease; AltName: Full=PR; AltName: Full=Retropepsin [Human immunodeficiency virus type 1 (CDC-451 ISOLATE)]
550 aa protein
accession:P05960.3
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
igE-binding protein-like ...
igE-binding protein-like [Mus musculus]
602 aa protein
accession:XP_036016754.1
CCHC-type zinc finger, nucleic acid binding protein b ...
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
161 aa protein
accession:NP_001313334.1
hypothetical protein DDB_G0293328 ...
hypothetical protein DDB_G0293328 [Dictyostelium discoideum AX4]
131 aa protein
accession:XP_629203.1
mRNA-binding translational activator GIS2 ...
mRNA-binding translational activator GIS2 [Saccharomyces cerevisiae S288C]
153 aa protein
accession:NP_014144.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
86.7 86.7 27% 2e-1631.58% XP_047305371.1
2
igE-binding protein-like [Mus musculus]
73.2 73.2 26% 3e-1232.89% XP_036016754.1
3
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
56.2 206 21% 6e-0833.33% NP_001313334.1
4
hypothetical protein DDB_G0293328 [Dictyostelium discoideum AX4]
53.5 99.4 8% 3e-0740.74% XP_629203.1
5
mRNA-binding translational activator GIS2 [Saccharomyces cerevisiae S288C]
52.4 185 16% 9e-0737.50% NP_014144.1