Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P0C776.1
RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p19; Contains: RecName: Full=p2A; Contains: RecName: Full=p2B; Contains: RecName: Full=p10; Contains: RecName: Full=Capsid protein p27, alternate cleaved 1; Contains: RecName: Full=Capsid protein p27, alternate cleaved 2; Contains: RecName: Full=Spacer peptide; Short=SP; AltName: Full=p3; Contains: RecName: Full=Nucleocapsid protein p12; AltName: Full=NCp12; Contains: RecName: Full=Protease p15 [Avian leukosis virus - RSA]
...
Query length:
701 aa
DOMAINS: and other(s) domains
...
uncharacterized protein
...
uncharacterized protein [Danio rerio]
309 aa protein
accession:XP_017209869.1
mRNA-binding translational activator GIS2
...
mRNA-binding translational activator GIS2 [Saccharomyces cerevisiae S288C]
153 aa protein
accession:NP_014144.1
zinc knuckle (CCHC-type) family protein
...
zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
409 aa protein
accession:NP_001330528.1
Query: RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p19; Contains: RecName: Full=p2A; Contains: RecName: Full=p2B; Contains: RecName: Full=p10; Contains: RecName: Full=Capsid protein p27, alternate cleaved 1; Contains: RecName: Full=Capsid protein p27, alternate cleaved 2; Contains: RecName: Full=Spacer peptide; Short=SP; AltName: Full=p3; Contains: RecName: Full=Nucleocapsid protein p12; AltName: Full=NCp12; Contains: RecName: Full=Protease p15
...
RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p19; Contains: RecName: Full=p2A; Contains: RecName: Full=p2B; Contains: RecName: Full=p10; Contains: RecName: Full=Capsid protein p27, alternate cleaved 1; Contains: RecName: Full=Capsid protein p27, alternate cleaved 2; Contains: RecName: Full=Spacer peptide; Short=SP; AltName: Full=p3; Contains: RecName: Full=Nucleocapsid protein p12; AltName: Full=NCp12; Contains: RecName: Full=Protease p15 [Avian leukosis virus - RSA]
701 aa protein
accession:P0C776.1
igE-binding protein-like
...
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
DOMAINS: and other(s) domains
...
uncharacterized protein [Danio rerio]
309 aa protein
accession:XP_017209869.1
mRNA-binding translational activator GIS2 [Saccharomyces cerevisiae S288C]
153 aa protein
accession:NP_014144.1
zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
409 aa protein
accession:NP_001330528.1
RecName: Full=Gag polyprotein; Contains: RecName: Full=Matrix protein p19; Contains: RecName: Full=p2A; Contains: RecName: Full=p2B; Contains: RecName: Full=p10; Contains: RecName: Full=Capsid protein p27, alternate cleaved 1; Contains: RecName: Full=Capsid protein p27, alternate cleaved 2; Contains: RecName: Full=Spacer peptide; Short=SP; AltName: Full=p3; Contains: RecName: Full=Nucleocapsid protein p12; AltName: Full=NCp12; Contains: RecName: Full=Protease p15 [Avian leukosis virus - RSA]
701 aa protein
accession:P0C776.1
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 87.4 | 87.4 | 44% | 2e-16 | 26.73% | XP_036016771.1 | |
2 | 44.7 | 82.0 | 6% | 7e-04 | 36.73% | NP_014144.1 | |
3 | 46.6 | 46.6 | 14% | 0.001 | 29.52% | XP_016863086.1 | |
4 | 45.8 | 45.8 | 11% | 0.001 | 28.21% | XP_017209869.1 | |
5 | 43.9 | 43.9 | 12% | 0.005 | 30.43% | NP_001330528.1 |