Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P11269.3
RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Radiation murine leukemia virus]
...
Query length:
537 aa
DOMAINS: and other(s) domains
...
reticulocyte binding protein 2 homologue a
...
reticulocyte binding protein 2 homologue a [Plasmodium falciparum 3D7]
3130 aa protein
accession:XP_001350083.1
zinc finger-like gene 1b
...
zinc finger-like gene 1b [Danio rerio]
505 aa protein
accession:NP_001107105.1
uncharacterized protein LOC107986768
...
uncharacterized protein LOC107986768 [Homo sapiens]
333 aa protein
accession:XP_047277128.1
Query: RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag
...
RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Radiation murine leukemia virus]
537 aa protein
accession:P11269.3
uncharacterized protein LOC118567843
...
uncharacterized protein LOC118567843 [Mus musculus]
344 aa protein
accession:XP_036012047.1
DOMAINS: and other(s) domains
...
reticulocyte binding protein 2 homologue a [Plasmodium falciparum 3D7]
3130 aa protein
accession:XP_001350083.1
zinc finger-like gene 1b [Danio rerio]
505 aa protein
accession:NP_001107105.1
uncharacterized protein LOC107986768 [Homo sapiens]
333 aa protein
accession:XP_047277128.1
RecName: Full=Gag polyprotein; AltName: Full=Core polyprotein; Contains: RecName: Full=Matrix protein p15; Short=MA; Contains: RecName: Full=RNA-binding phosphoprotein p12; AltName: Full=pp12; Contains: RecName: Full=Capsid protein p30; Short=CA; Contains: RecName: Full=Nucleocapsid protein p10-Gag; Short=NC-gag [Radiation murine leukemia virus]
537 aa protein
accession:P11269.3
uncharacterized protein LOC118567843 [Mus musculus]
344 aa protein
accession:XP_036012047.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 422 | 422 | 47% | 2e-144 | 81.89% | XP_036012047.1 | |
| 2 | 53.1 | 53.1 | 63% | 3e-06 | 25.00% | XP_047277128.1 | |
| 3 | 40.0 | 40.0 | 10% | 0.017 | 32.81% | XP_040867871.1 | |
| 4 | 39.3 | 39.3 | 31% | 0.11 | 24.31% | NP_001107105.1 | |
| 5 | 38.9 | 38.9 | 15% | 0.21 | 23.46% | XP_001350083.1 |