Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P11368.1
RecName: Full=Intracisternal A-particle Pol-related polyprotein; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Mouse intracisternal A-particle MIA14]
...
Query length:
867 aa
DOMAINS: and other(s) domains
...
gag-pol fusion protein
...
gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1498 aa protein
accession:NP_012184.1
uncharacterized protein LOC112997809
...
uncharacterized protein LOC112997809 [Glycine max]
1449 aa protein
accession:XP_025979678.1
uncharacterized protein
...
uncharacterized protein [Danio rerio]
1990 aa protein
accession:XP_068075431.1
agouti-signaling protein isoform X1
...
agouti-signaling protein isoform X1 [Mus musculus]
819 aa protein
accession:XP_017174599.2
Query: RecName: Full=Intracisternal A-particle Pol-related polyprotein; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN
...
RecName: Full=Intracisternal A-particle Pol-related polyprotein; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Mouse intracisternal A-particle MIA14]
867 aa protein
accession:P11368.1
contactin-5 isoform X3
...
contactin-5 isoform X3 [Mus musculus]
1405 aa protein
accession:XP_036010833.1
DOMAINS: and other(s) domains
...
gag-pol fusion protein [Saccharomyces cerevisiae S288C]
1498 aa protein
accession:NP_012184.1
uncharacterized protein LOC112997809 [Glycine max]
1449 aa protein
accession:XP_025979678.1
uncharacterized protein [Danio rerio]
1990 aa protein
accession:XP_068075431.1
agouti-signaling protein isoform X1 [Mus musculus]
819 aa protein
accession:XP_017174599.2
RecName: Full=Intracisternal A-particle Pol-related polyprotein; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [Mouse intracisternal A-particle MIA14]
867 aa protein
accession:P11368.1
contactin-5 isoform X3 [Mus musculus]
1405 aa protein
accession:XP_036010833.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 670 | 670 | 85% | 0.0 | 46.41% | XP_017174599.2 | |
| 2 | 92.8 | 92.8 | 33% | 1e-17 | 25.85% | NP_012184.1 | |
| 3 | 86.3 | 86.3 | 35% | 1e-15 | 24.11% | XP_068075431.1 | |
| 4 | 80.9 | 80.9 | 25% | 4e-14 | 27.56% | XP_025979678.1 | |
| 5 | 493 | 493 | 34% | 1e-154 | 81.54% | XP_036010833.1 |