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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: P17756.4 RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag [Human immunodeficiency virus type 2 (ISOLATE D194)] ... Query length: 521 aa
Query: RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag ...
RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag [Human immunodeficiency virus type 2 (ISOLATE D194)]
521 aa protein
accession:P17756.4
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
igE-binding protein-like ...
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
CCHC-type zinc finger nucleic acid binding protein, isoform B ...
CCHC-type zinc finger nucleic acid binding protein, isoform B [Drosophila melanogaster]
165 aa protein
accession:NP_001188992.1
CCHC-type zinc finger, nucleic acid binding protein b ...
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
161 aa protein
accession:NP_001313334.1
universal minicircle sequence binding protein, putative ...
universal minicircle sequence binding protein, putative [Leishmania donovani]
115 aa protein
accession:XP_003865283.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
70.1 70.1 27% 3e-1128.83% XP_047305371.1
2
igE-binding protein-like [Mus musculus]
68.9 68.9 31% 6e-1128.04% XP_036016771.1
3
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
48.1 181 8% 3e-0540.91% NP_001313334.1
4
CCHC-type zinc finger nucleic acid binding protein, isoform B [Drosophila melanogaster]
48.1 134 12% 4e-0537.29% NP_001188992.1
5
universal minicircle sequence binding protein, putative [Leishmania donovani]
45.8 128 8% 7e-0539.53% XP_003865283.1