Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P18856.2
RecName: Full=Collagen EMF1-alpha; AltName: Full=Fibrillar collagen; Flags: Precursor [Ephydatia muelleri]
...
Query length:
547 aa
DOMAINS: and other(s) domains
...
Query: RecName: Full=Collagen EMF1-alpha; AltName: Full=Fibrillar collagen; Flags: Precursor
...
RecName: Full=Collagen EMF1-alpha; AltName: Full=Fibrillar collagen; Flags: Precursor [Ephydatia muelleri]
547 aa protein
accession:P18856.2
collagen alpha-2(I) chain isoform X1
...
collagen alpha-2(I) chain isoform X1 [Danio rerio]
1352 aa protein
accession:XP_068071141.1
collagen alpha-3(V) chain isoform X3
...
collagen alpha-3(V) chain isoform X3 [Rattus norvegicus]
1200 aa protein
accession:XP_063122134.1
collagen alpha-1(XXVII) chain isoform X3
...
collagen alpha-1(XXVII) chain isoform X3 [Mus musculus]
1828 aa protein
accession:XP_036020100.1
collagen alpha-1(XXVII) chain isoform X4
...
collagen alpha-1(XXVII) chain isoform X4 [Homo sapiens]
1840 aa protein
accession:XP_047279948.1
collagen alpha-1(XXVII) chain B precursor
...
collagen alpha-1(XXVII) chain B precursor [Danio rerio]
1658 aa protein
accession:NP_001074044.1
DOMAINS: and other(s) domains
...
RecName: Full=Collagen EMF1-alpha; AltName: Full=Fibrillar collagen; Flags: Precursor [Ephydatia muelleri]
547 aa protein
accession:P18856.2
collagen alpha-2(I) chain isoform X1 [Danio rerio]
1352 aa protein
accession:XP_068071141.1
collagen alpha-3(V) chain isoform X3 [Rattus norvegicus]
1200 aa protein
accession:XP_063122134.1
collagen alpha-1(XXVII) chain isoform X3 [Mus musculus]
1828 aa protein
accession:XP_036020100.1
collagen alpha-1(XXVII) chain isoform X4 [Homo sapiens]
1840 aa protein
accession:XP_047279948.1
collagen alpha-1(XXVII) chain B precursor [Danio rerio]
1658 aa protein
accession:NP_001074044.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 243 | 1005 | 99% | 7e-69 | 37.96% | XP_068071141.1 | |
| 2 | 197 | 920 | 100% | 5e-53 | 33.61% | XP_036020100.1 | |
| 3 | 192 | 717 | 99% | 3e-51 | 31.75% | XP_063122134.1 | |
| 4 | 189 | 812 | 100% | 3e-50 | 34.17% | XP_047279948.1 | |
| 5 | 238 | 1393 | 100% | 6e-67 | 35.22% | NP_001074044.1 |