Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P19712.2
RecName: Full=Genome polyprotein; Contains: RecName: Full=N-terminal protease; Short=N-pro; AltName: Full=Autoprotease p20; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=E(rns) glycoprotein; AltName: Full=gp44/48; Contains: RecName: Full=Envelope glycoprotein E1; AltName: Full=gp33; Contains: RecName: Full=Envelope glycoprotein E2; AltName: Full=gp55; Contains: RecName: Full=Viroporin p7; Contains: RecName: Full=Non-structural protein 2-3; Short=NS2-3; Contains: RecName: Full=Cysteine protease NS2; AltName: Full=Non-structural protein 2; Contains: RecName: Full=Serine protease NS3; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=Non-structural protein 5A; Short=NS5A; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=NS5B [Classical swine fever virus - Alfort/Tuebingen]
...
Query length:
3898 aa
DOMAINS: and other(s) domains
...
Query: RecName: Full=Genome polyprotein; Contains: RecName: Full=N-terminal protease; Short=N-pro; AltName: Full=Autoprotease p20; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=E(rns) glycoprotein; AltName: Full=gp44/48; Contains: RecName: Full=Envelope glycoprotein E1; AltName: Full=gp33; Contains: RecName: Full=Envelope glycoprotein E2; AltName: Full=gp55; Contains: RecName: Full=Viroporin p7; Contains: RecName: Full=Non-structural protein 2-3; Short=NS2-3; Contains: RecName: Full=Cysteine protease NS2; AltName: Full=Non-structural protein 2; Contains: RecName: Full=Serine protease NS3; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=Non-structural protein 5A; Short=NS5A; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=NS5B
...
RecName: Full=Genome polyprotein; Contains: RecName: Full=N-terminal protease; Short=N-pro; AltName: Full=Autoprotease p20; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=E(rns) glycoprotein; AltName: Full=gp44/48; Contains: RecName: Full=Envelope glycoprotein E1; AltName: Full=gp33; Contains: RecName: Full=Envelope glycoprotein E2; AltName: Full=gp55; Contains: RecName: Full=Viroporin p7; Contains: RecName: Full=Non-structural protein 2-3; Short=NS2-3; Contains: RecName: Full=Cysteine protease NS2; AltName: Full=Non-structural protein 2; Contains: RecName: Full=Serine protease NS3; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=Non-structural protein 5A; Short=NS5A; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=NS5B [Classical swine fever virus - Alfort/Tuebingen]
3898 aa protein
accession:P19712.2
ATP-dependent RNA helicase DHX30 isoform X4
...
ATP-dependent RNA helicase DHX30 isoform X4 [Homo sapiens]
1162 aa protein
accession:XP_006713096.1
ATP-dependent RNA helicase DHX30 isoform X3
...
ATP-dependent RNA helicase DHX30 isoform X3 [Mus musculus]
1186 aa protein
accession:XP_006512373.1
putative ATP-dependent RNA helicase DHX35 homolog
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putative ATP-dependent RNA helicase DHX35 homolog [Caenorhabditis elegans]
732 aa protein
accession:NP_497420.1
probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
...
probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 [Glycine max]
696 aa protein
accession:XP_003524885.1
DEAD/DEAH box helicase
...
DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
1106 aa protein
accession:XP_638017.1
DOMAINS: and other(s) domains
...
RecName: Full=Genome polyprotein; Contains: RecName: Full=N-terminal protease; Short=N-pro; AltName: Full=Autoprotease p20; Contains: RecName: Full=Capsid protein C; AltName: Full=Core protein; Contains: RecName: Full=E(rns) glycoprotein; AltName: Full=gp44/48; Contains: RecName: Full=Envelope glycoprotein E1; AltName: Full=gp33; Contains: RecName: Full=Envelope glycoprotein E2; AltName: Full=gp55; Contains: RecName: Full=Viroporin p7; Contains: RecName: Full=Non-structural protein 2-3; Short=NS2-3; Contains: RecName: Full=Cysteine protease NS2; AltName: Full=Non-structural protein 2; Contains: RecName: Full=Serine protease NS3; AltName: Full=Non-structural protein 3; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; Contains: RecName: Full=Non-structural protein 5A; Short=NS5A; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=NS5B [Classical swine fever virus - Alfort/Tuebingen]
3898 aa protein
accession:P19712.2
ATP-dependent RNA helicase DHX30 isoform X4 [Homo sapiens]
1162 aa protein
accession:XP_006713096.1
ATP-dependent RNA helicase DHX30 isoform X3 [Mus musculus]
1186 aa protein
accession:XP_006512373.1
putative ATP-dependent RNA helicase DHX35 homolog [Caenorhabditis elegans]
732 aa protein
accession:NP_497420.1
probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 [Glycine max]
696 aa protein
accession:XP_003524885.1
DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
1106 aa protein
accession:XP_638017.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 69.3 | 69.3 | 7% | 7e-10 | 22.99% | NP_497420.1 | |
2 | 67.8 | 67.8 | 7% | 2e-09 | 26.22% | XP_006713096.1 | |
3 | 67.4 | 67.4 | 7% | 3e-09 | 24.57% | XP_003524885.1 | |
4 | 66.6 | 66.6 | 7% | 6e-09 | 26.22% | XP_006512373.1 | |
5 | 63.2 | 63.2 | 7% | 8e-08 | 25.67% | XP_638017.1 |