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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: P27972.1 RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide p1; Contains: RecName: Full=p6-gag [Simian immunodeficiency virus (AGM155 ISOLATE)] ... Query length: 520 aa
CCHC-type domain-containing protein ...
CCHC-type domain-containing protein [Caenorhabditis elegans]
113 aa protein
accession:NP_001255048.1
CCHC-type zinc finger, nucleic acid binding protein b ...
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
161 aa protein
accession:NP_001313334.1
mRNA-binding translational activator GIS2 ...
mRNA-binding translational activator GIS2 [Saccharomyces cerevisiae S288C]
153 aa protein
accession:NP_014144.1
Query: RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide p1; Contains: RecName: Full=p6-gag ...
RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide p1; Contains: RecName: Full=p6-gag [Simian immunodeficiency virus (AGM155 ISOLATE)]
520 aa protein
accession:P27972.1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
igE-binding protein-like ...
igE-binding protein-like [Mus musculus]
601 aa protein
accession:XP_036016762.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
89.0 89.0 28% 3e-1732.74% XP_047305371.1
2
igE-binding protein-like [Mus musculus]
74.7 74.7 29% 9e-1334.59% XP_036016762.1
3
CCHC-type domain-containing protein [Caenorhabditis elegans]
53.5 53.5 7% 2e-0751.28% NP_001255048.1
4
CCHC-type zinc finger, nucleic acid binding protein b [Danio rerio]
54.7 286 9% 2e-0751.16% NP_001313334.1
5
mRNA-binding translational activator GIS2 [Saccharomyces cerevisiae S288C]
50.8 130 15% 3e-0650.00% NP_014144.1