Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P63145.2
RecName: Full=Endogenous retrovirus group K member 24 Gag polyprotein; AltName: Full=HERV-K101 Gag protein; AltName: Full=HERV-K_22q11.21 provirus ancestral Gag polyprotein; Short=Gag polyprotein [Homo sapiens]
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Query length:
666 aa
DOMAINS: and other(s) domains
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ATP-dependent RNA helicase glh-4
...
ATP-dependent RNA helicase glh-4 [Caenorhabditis elegans]
1156 aa protein
accession:NP_491207.3
zinc knuckle (CCHC-type) family protein
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zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
551 aa protein
accession:NP_189945.1
TRAMP complex RNA-binding subunit
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TRAMP complex RNA-binding subunit [Saccharomyces cerevisiae S288C]
360 aa protein
accession:NP_012186.1
igE-binding protein-like
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igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
Query: RecName: Full=Endogenous retrovirus group K member 24 Gag polyprotein; AltName: Full=HERV-K101 Gag protein; AltName: Full=HERV-K_22q11.21 provirus ancestral Gag polyprotein; Short=Gag polyprotein
...
RecName: Full=Endogenous retrovirus group K member 24 Gag polyprotein; AltName: Full=HERV-K101 Gag protein; AltName: Full=HERV-K_22q11.21 provirus ancestral Gag polyprotein; Short=Gag polyprotein [Homo sapiens]
666 aa protein
accession:P63145.2
endogenous retrovirus group K member 5 Gag polyprotein isoform X2
...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
DOMAINS: and other(s) domains
...
ATP-dependent RNA helicase glh-4 [Caenorhabditis elegans]
1156 aa protein
accession:NP_491207.3
zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana]
551 aa protein
accession:NP_189945.1
TRAMP complex RNA-binding subunit [Saccharomyces cerevisiae S288C]
360 aa protein
accession:NP_012186.1
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
RecName: Full=Endogenous retrovirus group K member 24 Gag polyprotein; AltName: Full=HERV-K101 Gag protein; AltName: Full=HERV-K_22q11.21 provirus ancestral Gag polyprotein; Short=Gag polyprotein [Homo sapiens]
666 aa protein
accession:P63145.2
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1103 | 1103 | 100% | 0.0 | 82.21% | XP_047305371.1 | |
| 2 | 157 | 157 | 43% | 3e-39 | 32.32% | XP_036016771.1 | |
| 3 | 45.1 | 45.1 | 7% | 0.002 | 39.22% | NP_189945.1 | |
| 4 | 42.0 | 42.0 | 7% | 0.030 | 38.46% | NP_491207.3 | |
| 5 | 40.8 | 40.8 | 13% | 0.040 | 28.26% | NP_012186.1 |