Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: P86290.1 RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen [Brachylophosaurus canadensis] ... Query length: 36 aa

collagen alpha-2(I) chain isoform X1 ...

collagen alpha-2(I) chain isoform X1 [Danio rerio]

1352 aa protein

accession:XP_068071141.1

Alignment Sequence Identical proteins

collagen alpha-3(V) chain isoform X3 ...

collagen alpha-3(V) chain isoform X3 [Rattus norvegicus]

1200 aa protein

accession:XP_063122134.1

Alignment Sequence Identical proteins

Query: RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen ...

RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen [Brachylophosaurus canadensis]

36 aa protein

accession:P86290.1

Sequence Identical proteins

collagen alpha-1(XXVII) chain isoform X4 ...

collagen alpha-1(XXVII) chain isoform X4 [Homo sapiens]

1840 aa protein

accession:XP_047279948.1

Alignment Sequence Identical proteins

collagen alpha-1(XXVII) chain isoform X3 ...

collagen alpha-1(XXVII) chain isoform X3 [Mus musculus]

1828 aa protein

accession:XP_036020100.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_068071141.1\|	collagen alpha-2(I) chain isoform X1 [Danio rerio]	37.7	188	100%	3e-04	66.67%	XP_068071141.1
2 Select seq ref\|XP_047279948.1\|	collagen alpha-1(XXVII) chain isoform X4 [Homo sapiens]	35.4	35.4	97%	0.002	57.14%	XP_047279948.1
3 Select seq ref\|XP_036020100.1\|	collagen alpha-1(XXVII) chain isoform X3 [Mus musculus]	35.0	67.8	97%	0.002	57.14%	XP_036020100.1
4 Select seq ref\|XP_063122134.1\|	collagen alpha-3(V) chain isoform X3 [Rattus norvegicus]	34.3	34.3	100%	0.004	58.33%	XP_063122134.1
5 Select seq ref\|XP_021324338.1\|	scavenger receptor class A member 3 isoform X2 [Danio rerio]	36.2	98.6	100%	0.001	47.22%	XP_021324338.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments