Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
PKM47785.1
AcrB/AcrD/AcrF family protein [Firmicutes bacterium HGW-Firmicutes-8]
...
Query length:
1056 aa
DOMAINS: and other(s) domains
...
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Clostridioides difficile]
1044 aa protein
accession:WP_011861545.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Shewanella oneidensis]
1031 aa protein
accession:WP_011071991.1
multidrug efflux RND transporter permease subunit MdtB
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multidrug efflux RND transporter permease subunit MdtB [Enterobacteriaceae]
1040 aa protein
accession:WP_001197875.1
multidrug efflux RND transporter permease subunit MdtB
...
multidrug efflux RND transporter permease subunit MdtB [Escherichia coli]
1040 aa protein
accession:WP_001197863.1
Query: AcrB/AcrD/AcrF family protein
...
AcrB/AcrD/AcrF family protein [Firmicutes bacterium HGW-Firmicutes-8]
1056 aa protein
accession:PKM47785.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Microcystis aeruginosa]
1021 aa protein
accession:WP_061431841.1
DOMAINS: and other(s) domains
...
efflux RND transporter permease subunit [Clostridioides difficile]
1044 aa protein
accession:WP_011861545.1
efflux RND transporter permease subunit [Shewanella oneidensis]
1031 aa protein
accession:WP_011071991.1
multidrug efflux RND transporter permease subunit MdtB [Enterobacteriaceae]
1040 aa protein
accession:WP_001197875.1
multidrug efflux RND transporter permease subunit MdtB [Escherichia coli]
1040 aa protein
accession:WP_001197863.1
AcrB/AcrD/AcrF family protein [Firmicutes bacterium HGW-Firmicutes-8]
1056 aa protein
accession:PKM47785.1
efflux RND transporter permease subunit [Microcystis aeruginosa]
1021 aa protein
accession:WP_061431841.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 535 | 535 | 99% | 4e-172 | 33.27% | WP_061431841.1 | |
| 2 | 499 | 499 | 98% | 3e-158 | 30.53% | WP_011861545.1 | |
| 3 | 463 | 463 | 97% | 8e-145 | 30.25% | WP_011071991.1 | |
| 4 | 400 | 400 | 98% | 2e-121 | 29.31% | WP_001197875.1 | |
| 5 | 399 | 399 | 98% | 7e-121 | 29.22% | WP_001197863.1 |