Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
PKN28102.1
type II secretion system protein GspF [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-22]
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Query length:
410 aa
DOMAINS: and other(s) domains
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type II secretion system F family protein
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type II secretion system F family protein [Deinococcus radiodurans]
406 aa protein
accession:WP_010888498.1
Query: type II secretion system protein GspF
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type II secretion system protein GspF [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-22]
410 aa protein
accession:PKN28102.1
GspF family T2SS innner membrane protein variant XcpS
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GspF family T2SS innner membrane protein variant XcpS [Pseudomonas]
405 aa protein
accession:WP_003091376.1
type II secretion system inner membrane protein GspF
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type II secretion system inner membrane protein GspF [Enterobacteriaceae]
398 aa protein
accession:WP_001109573.1
type II secretion system inner membrane protein GspF
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type II secretion system inner membrane protein GspF [Escherichia coli]
407 aa protein
accession:WP_001173152.1
type II secretion system inner membrane protein GspF
...
type II secretion system inner membrane protein GspF [Shewanella oneidensis]
407 aa protein
accession:WP_011070565.1
DOMAINS: and other(s) domains
...
type II secretion system F family protein [Deinococcus radiodurans]
406 aa protein
accession:WP_010888498.1
type II secretion system protein GspF [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-22]
410 aa protein
accession:PKN28102.1
GspF family T2SS innner membrane protein variant XcpS [Pseudomonas]
405 aa protein
accession:WP_003091376.1
type II secretion system inner membrane protein GspF [Enterobacteriaceae]
398 aa protein
accession:WP_001109573.1
type II secretion system inner membrane protein GspF [Escherichia coli]
407 aa protein
accession:WP_001173152.1
type II secretion system inner membrane protein GspF [Shewanella oneidensis]
407 aa protein
accession:WP_011070565.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 292 | 292 | 99% | 2e-94 | 39.42% | WP_003091376.1 | |
| 2 | 285 | 285 | 99% | 1e-91 | 39.46% | WP_011070565.1 | |
| 3 | 283 | 283 | 98% | 8e-91 | 36.86% | WP_010888498.1 | |
| 4 | 254 | 254 | 98% | 5e-80 | 34.81% | WP_001109573.1 | |
| 5 | 247 | 247 | 99% | 6e-77 | 36.01% | WP_001173152.1 |