Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
PKN48010.1
ribosomal RNA small subunit methyltransferase A [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-17]
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Query length:
272 aa
DOMAINS: and other(s) domains
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Query: ribosomal RNA small subunit methyltransferase A
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ribosomal RNA small subunit methyltransferase A [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-17]
272 aa protein
accession:PKN48010.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
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16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Pseudomonas]
268 aa protein
accession:WP_003113212.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
...
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Shewanella oneidensis]
268 aa protein
accession:WP_011073442.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
...
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Escherichia coli]
273 aa protein
accession:WP_001065380.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
...
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Neisseria meningitidis]
259 aa protein
accession:WP_002229195.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
...
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Synechocystis salina]
276 aa protein
accession:WP_194018886.1
DOMAINS: and other(s) domains
...
ribosomal RNA small subunit methyltransferase A [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-17]
272 aa protein
accession:PKN48010.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Pseudomonas]
268 aa protein
accession:WP_003113212.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Shewanella oneidensis]
268 aa protein
accession:WP_011073442.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Escherichia coli]
273 aa protein
accession:WP_001065380.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Neisseria meningitidis]
259 aa protein
accession:WP_002229195.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Synechocystis salina]
276 aa protein
accession:WP_194018886.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 137 | 137 | 89% | 5e-38 | 35.48% | WP_003113212.1 | |
| 2 | 122 | 122 | 92% | 2e-32 | 32.57% | WP_011073442.1 | |
| 3 | 119 | 119 | 91% | 5e-31 | 32.54% | WP_001065380.1 | |
| 4 | 113 | 113 | 92% | 3e-29 | 32.55% | WP_002229195.1 | |
| 5 | 113 | 113 | 93% | 7e-29 | 32.95% | WP_194018886.1 |