Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: PNF44146.1 CCR4-NOT transcription complex subunit 7 [Cryptotermes secundus] ... Query length: 291 aa

CAF1 family protein ...

CAF1 family protein [Dictyostelium discoideum AX4]

367 aa protein

accession:XP_638651.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 8 isoform X1 ...

CCR4-NOT transcription complex subunit 8 isoform X1 [Danio rerio]

285 aa protein

accession:XP_005173934.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 7 isoform 4 ...

CCR4-NOT transcription complex subunit 7 isoform 4 [Homo sapiens]

256 aa protein

accession:NP_001309023.1

Alignment Sequence Identical proteins

CCR4-NOT transcription complex subunit 7 isoform 2 ...

CCR4-NOT transcription complex subunit 7 isoform 2 [Mus musculus]

248 aa protein

accession:NP_001258472.1

Alignment Sequence Identical proteins

Query: CCR4-NOT transcription complex subunit 7 ...

CCR4-NOT transcription complex subunit 7 [Cryptotermes secundus]

291 aa protein

accession:PNF44146.1

Sequence Identical proteins

Pop2, isoform D ...

Pop2, isoform D [Drosophila melanogaster]

357 aa protein

accession:NP_001163429.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001163429.1\|	Pop2, isoform D [Drosophila melanogaster]	369	369	72%	4e-127	82.38%	NP_001163429.1
2 Select seq ref\|XP_005173934.1\|	CCR4-NOT transcription complex subunit 8 isoform X1 [Danio rerio]	308	308	63%	4e-104	75.81%	XP_005173934.1
3 Select seq ref\|NP_001309023.1\|	CCR4-NOT transcription complex subunit 7 isoform 4 [Homo sapiens]	303	303	63%	1e-102	75.27%	NP_001309023.1
4 Select seq ref\|NP_001258472.1\|	CCR4-NOT transcription complex subunit 7 isoform 2 [Mus musculus]	302	302	63%	2e-102	75.27%	NP_001258472.1
5 Select seq ref\|XP_638651.1\|	CAF1 family protein [Dictyostelium discoideum AX4]	264	264	63%	1e-85	67.74%	XP_638651.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments