Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: PPR17261.1 Rhomboid protease GluP [Alphaproteobacteria bacterium MarineAlpha9_Bin3] ... Query length: 241 aa

rhomboid protease PCP1 ...

rhomboid protease PCP1 [Saccharomyces cerevisiae S288C]

346 aa protein

accession:NP_011615.1

Alignment Sequence Identical proteins

rhomboid family intramembrane serine protease ...

rhomboid family intramembrane serine protease [Thermotoga maritima]

222 aa protein

accession:WP_004080389.1

Alignment Sequence Identical proteins

rhomboid family intramembrane serine protease ...

rhomboid family intramembrane serine protease [Streptomyces]

272 aa protein

accession:WP_161270259.1

Alignment Sequence Identical proteins

Query: Rhomboid protease GluP ...

Rhomboid protease GluP [Alphaproteobacteria bacterium MarineAlpha9_Bin3]

241 aa protein

accession:PPR17261.1

Sequence Identical proteins

rhomboid family protein ...

rhomboid family protein [Dictyostelium discoideum AX4]

489 aa protein

accession:XP_002649151.1

Alignment Sequence Identical proteins

Peptidase S54 rhomboid domain-containing protein ...

Peptidase S54 rhomboid domain-containing protein [Caenorhabditis elegans]

1203 aa protein

accession:NP_001041013.2

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_004080389.1\|	rhomboid family intramembrane serine protease [Thermotoga maritima]	171	171	92%	4e-52	40.27%	WP_004080389.1
2 Select seq ref\|WP_161270259.1\|	rhomboid family intramembrane serine protease [Streptomyces]	137	137	90%	4e-38	35.57%	WP_161270259.1
3 Select seq ref\|XP_002649151.1\|	rhomboid family protein [Dictyostelium discoideum AX4]	58.9	58.9	82%	1e-08	27.57%	XP_002649151.1
4 Select seq ref\|NP_011615.1\|	rhomboid protease PCP1 [Saccharomyces cerevisiae S288C]	56.2	56.2	65%	6e-08	29.65%	NP_011615.1
5 Select seq ref\|NP_001041013.2\|	Peptidase S54 rhomboid domain-containing protein [Caenorhabditis elegans]	56.6	56.6	41%	7e-08	31.68%	NP_001041013.2

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments