Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
PSN86729.1
hypothetical protein B9Q02_00725 [Candidatus Marsarchaeota G1 archaeon BE_D]
...
Query length:
225 aa
DOMAINS: and other(s) domains
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putative exosome subunit Rrp4
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putative exosome subunit Rrp4 [Schizosaccharomyces pombe]
329 aa protein
accession:NP_592984.1
exosome non-catalytic core subunit RRP4
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exosome non-catalytic core subunit RRP4 [Saccharomyces cerevisiae S288C]
359 aa protein
accession:NP_011936.1
hypothetical protein DDB_G0291310
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hypothetical protein DDB_G0291310 [Dictyostelium discoideum AX4]
380 aa protein
accession:XP_635135.1
Query: hypothetical protein B9Q02_00725
...
hypothetical protein B9Q02_00725 [Candidatus Marsarchaeota G1 archaeon BE_D]
225 aa protein
accession:PSN86729.1
exosome complex RNA-binding protein Rrp4
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exosome complex RNA-binding protein Rrp4 [Methanothermobacter]
311 aa protein
accession:WP_048175439.1
exosome complex RNA-binding protein Rrp4
...
exosome complex RNA-binding protein Rrp4 [Sulfolobus acidocaldarius]
249 aa protein
accession:WP_011277505.1
DOMAINS: and other(s) domains
...
putative exosome subunit Rrp4 [Schizosaccharomyces pombe]
329 aa protein
accession:NP_592984.1
exosome non-catalytic core subunit RRP4 [Saccharomyces cerevisiae S288C]
359 aa protein
accession:NP_011936.1
hypothetical protein DDB_G0291310 [Dictyostelium discoideum AX4]
380 aa protein
accession:XP_635135.1
hypothetical protein B9Q02_00725 [Candidatus Marsarchaeota G1 archaeon BE_D]
225 aa protein
accession:PSN86729.1
exosome complex RNA-binding protein Rrp4 [Methanothermobacter]
311 aa protein
accession:WP_048175439.1
exosome complex RNA-binding protein Rrp4 [Sulfolobus acidocaldarius]
249 aa protein
accession:WP_011277505.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 141 | 141 | 87% | 3e-40 | 40.61% | WP_011277505.1 | |
| 2 | 120 | 120 | 94% | 1e-31 | 32.86% | WP_048175439.1 | |
| 3 | 62.4 | 62.4 | 84% | 3e-10 | 25.76% | NP_592984.1 | |
| 4 | 55.5 | 55.5 | 73% | 9e-08 | 25.00% | NP_011936.1 | |
| 5 | 54.7 | 54.7 | 69% | 1e-07 | 24.39% | XP_635135.1 |