Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q00269.3
RecName: Full=Genome polyprotein; Contains: RecName: Full=Core protein precursor; AltName: Full=Capsid protein C; AltName: Full=p23; Contains: RecName: Full=Mature core protein; AltName: Full=p21; Contains: RecName: Full=Envelope glycoprotein E1; AltName: Full=gp32; AltName: Full=gp35; Contains: RecName: Full=Envelope glycoprotein E2; AltName: Full=NS1; AltName: Full=gp68; AltName: Full=gp70; Contains: RecName: Full=Viroporin p7; Contains: RecName: Full=Protease NS2; Short=p23; AltName: Full=Non-structural protein 2; Short=NS2; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Hepacivirin; AltName: Full=NS3 helicase; AltName: Full=NS3 protease; AltName: Full=NS3P; AltName: Full=Viroporin p70; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; AltName: Full=p8; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 5A; Short=NS5A; AltName: Full=p56/58; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=NS5B; AltName: Full=p68 [Hepatitis C virus (isolate HC-JT)]
...
Query length:
3010 aa
DOMAINS: and other(s) domains
...
Query: RecName: Full=Genome polyprotein; Contains: RecName: Full=Core protein precursor; AltName: Full=Capsid protein C; AltName: Full=p23; Contains: RecName: Full=Mature core protein; AltName: Full=p21; Contains: RecName: Full=Envelope glycoprotein E1; AltName: Full=gp32; AltName: Full=gp35; Contains: RecName: Full=Envelope glycoprotein E2; AltName: Full=NS1; AltName: Full=gp68; AltName: Full=gp70; Contains: RecName: Full=Viroporin p7; Contains: RecName: Full=Protease NS2; Short=p23; AltName: Full=Non-structural protein 2; Short=NS2; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Hepacivirin; AltName: Full=NS3 helicase; AltName: Full=NS3 protease; AltName: Full=NS3P; AltName: Full=Viroporin p70; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; AltName: Full=p8; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 5A; Short=NS5A; AltName: Full=p56/58; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=NS5B; AltName: Full=p68
...
RecName: Full=Genome polyprotein; Contains: RecName: Full=Core protein precursor; AltName: Full=Capsid protein C; AltName: Full=p23; Contains: RecName: Full=Mature core protein; AltName: Full=p21; Contains: RecName: Full=Envelope glycoprotein E1; AltName: Full=gp32; AltName: Full=gp35; Contains: RecName: Full=Envelope glycoprotein E2; AltName: Full=NS1; AltName: Full=gp68; AltName: Full=gp70; Contains: RecName: Full=Viroporin p7; Contains: RecName: Full=Protease NS2; Short=p23; AltName: Full=Non-structural protein 2; Short=NS2; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Hepacivirin; AltName: Full=NS3 helicase; AltName: Full=NS3 protease; AltName: Full=NS3P; AltName: Full=Viroporin p70; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; AltName: Full=p8; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 5A; Short=NS5A; AltName: Full=p56/58; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=NS5B; AltName: Full=p68 [Hepatitis C virus (isolate HC-JT)]
3010 aa protein
accession:Q00269.3
ATP-dependent DNA helicase Q5 isoform X10
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ATP-dependent DNA helicase Q5 isoform X10 [Homo sapiens]
549 aa protein
accession:XP_047293047.1
ATP-dependent DNA helicase Q5 isoform X1
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ATP-dependent DNA helicase Q5 isoform X1 [Homo sapiens]
1012 aa protein
accession:XP_005257875.1
ATP-dependent DNA helicase Q5 isoform 1
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ATP-dependent DNA helicase Q5 isoform 1 [Homo sapiens]
991 aa protein
accession:NP_004250.4
ATP-dependent DNA helicase Q5 isoform 2
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ATP-dependent DNA helicase Q5 isoform 2 [Homo sapiens]
435 aa protein
accession:NP_001003715.1
ATP-dependent DNA helicase Q5 isoform 3
...
ATP-dependent DNA helicase Q5 isoform 3 [Homo sapiens]
410 aa protein
accession:NP_001003716.1
DOMAINS: and other(s) domains
...
RecName: Full=Genome polyprotein; Contains: RecName: Full=Core protein precursor; AltName: Full=Capsid protein C; AltName: Full=p23; Contains: RecName: Full=Mature core protein; AltName: Full=p21; Contains: RecName: Full=Envelope glycoprotein E1; AltName: Full=gp32; AltName: Full=gp35; Contains: RecName: Full=Envelope glycoprotein E2; AltName: Full=NS1; AltName: Full=gp68; AltName: Full=gp70; Contains: RecName: Full=Viroporin p7; Contains: RecName: Full=Protease NS2; Short=p23; AltName: Full=Non-structural protein 2; Short=NS2; Contains: RecName: Full=Serine protease/helicase NS3; AltName: Full=Hepacivirin; AltName: Full=NS3 helicase; AltName: Full=NS3 protease; AltName: Full=NS3P; AltName: Full=Viroporin p70; Contains: RecName: Full=Non-structural protein 4A; Short=NS4A; AltName: Full=p8; Contains: RecName: Full=Non-structural protein 4B; Short=NS4B; AltName: Full=p27; Contains: RecName: Full=Non-structural protein 5A; Short=NS5A; AltName: Full=p56/58; Contains: RecName: Full=RNA-directed RNA polymerase; AltName: Full=NS5B; AltName: Full=p68 [Hepatitis C virus (isolate HC-JT)]
3010 aa protein
accession:Q00269.3
ATP-dependent DNA helicase Q5 isoform X10 [Homo sapiens]
549 aa protein
accession:XP_047293047.1
ATP-dependent DNA helicase Q5 isoform X1 [Homo sapiens]
1012 aa protein
accession:XP_005257875.1
ATP-dependent DNA helicase Q5 isoform 1 [Homo sapiens]
991 aa protein
accession:NP_004250.4
ATP-dependent DNA helicase Q5 isoform 2 [Homo sapiens]
435 aa protein
accession:NP_001003715.1
ATP-dependent DNA helicase Q5 isoform 3 [Homo sapiens]
410 aa protein
accession:NP_001003716.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 41.6 | 41.6 | 2% | 0.17 | 33.33% | XP_047293047.1 | |
| 2 | 41.2 | 41.2 | 2% | 0.17 | 33.33% | NP_001003715.1 | |
| 3 | 41.2 | 41.2 | 2% | 0.18 | 33.33% | NP_001003716.1 | |
| 4 | 41.6 | 41.6 | 1% | 0.19 | 42.31% | XP_005257875.1 | |
| 5 | 41.6 | 41.6 | 1% | 0.20 | 42.31% | NP_004250.4 |