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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: Q0R5R2.3 RecName: Full=Gag-Pro-Pol polyprotein; AltName: Full=Pr160Gag-Pro-Pol; Contains: RecName: Full=Matrix protein p19; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Nucleocapsid protein p15-pro; Short=NC'; Short=NC-pro; Contains: RecName: Full=Protease; Short=PR; Contains: RecName: Full=p1; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [HTLV-3 strain 2026ND] ... Query length: 1440 aa
Query: RecName: Full=Gag-Pro-Pol polyprotein; AltName: Full=Pr160Gag-Pro-Pol; Contains: RecName: Full=Matrix protein p19; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Nucleocapsid protein p15-pro; Short=NC'; Short=NC-pro; Contains: RecName: Full=Protease; Short=PR; Contains: RecName: Full=p1; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN ...
RecName: Full=Gag-Pro-Pol polyprotein; AltName: Full=Pr160Gag-Pro-Pol; Contains: RecName: Full=Matrix protein p19; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Nucleocapsid protein p15-pro; Short=NC'; Short=NC-pro; Contains: RecName: Full=Protease; Short=PR; Contains: RecName: Full=p1; Contains: RecName: Full=Reverse transcriptase/ribonuclease H; Short=RT; Contains: RecName: Full=Integrase; Short=IN [HTLV-3 strain 2026ND]
1440 aa protein
accession:Q0R5R2.3
LOW QUALITY PROTEIN: uncharacterized protein LOC120103612 ...
LOW QUALITY PROTEIN: uncharacterized protein LOC120103612 [Rattus norvegicus]
1612 aa protein
accession:XP_038969294.2
LOW QUALITY PROTEIN: uncharacterized protein LOC120093558 ...
LOW QUALITY PROTEIN: uncharacterized protein LOC120093558 [Rattus norvegicus]
1610 aa protein
accession:XP_063120484.1
uncharacterized protein Gm53480 ...
uncharacterized protein Gm53480 [Mus musculus]
1697 aa protein
accession:XP_036010828.1
uncharacterized protein LOC102669082 ...
uncharacterized protein LOC102669082 [Glycine max]
1149 aa protein
accession:XP_040870603.1
LOW QUALITY PROTEIN: retrotransposable element/transposon Tf2-type ...
LOW QUALITY PROTEIN: retrotransposable element/transposon Tf2-type [Schizosaccharomyces pombe]
1332 aa protein
accession:NP_001417963.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
LOW QUALITY PROTEIN: uncharacterized protein LOC120103612 [Rattus norvegicus]
129 129 37% 9e-2925.24% XP_038969294.2
2
uncharacterized protein Gm53480 [Mus musculus]
118 118 28% 2e-2526.64% XP_036010828.1
3
uncharacterized protein LOC102669082 [Glycine max]
85.1 85.1 16% 2e-1528.00% XP_040870603.1
4
LOW QUALITY PROTEIN: retrotransposable element/transposon Tf2-type [Schizosaccharomyces pombe]
73.2 73.2 20% 8e-1224.75% NP_001417963.1
5
LOW QUALITY PROTEIN: uncharacterized protein LOC120093558 [Rattus norvegicus]
128 128 29% 1e-2827.31% XP_063120484.1