Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q1A268.3
RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Contains: RecName: Full=p6-gag [SIVcpz MB66]
...
Query length:
499 aa
DOMAINS: and other(s) domains
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Query: RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Contains: RecName: Full=p6-gag
...
RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Contains: RecName: Full=p6-gag [SIVcpz MB66]
499 aa protein
accession:Q1A268.3
endogenous retrovirus group K member 5 Gag polyprotein isoform X2
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endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
igE-binding protein-like
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igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
serine/arginine-rich splicing factor RS2Z32 isoform X1
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serine/arginine-rich splicing factor RS2Z32 isoform X1 [Glycine max]
287 aa protein
accession:XP_003521358.1
universal minicircle sequence binding protein, putative
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universal minicircle sequence binding protein, putative [Leishmania donovani]
115 aa protein
accession:XP_003865283.1
DOMAINS: and other(s) domains
...
RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Transframe peptide; Contains: RecName: Full=p6-gag [SIVcpz MB66]
499 aa protein
accession:Q1A268.3
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
serine/arginine-rich splicing factor RS2Z32 isoform X1 [Glycine max]
287 aa protein
accession:XP_003521358.1
universal minicircle sequence binding protein, putative [Leishmania donovani]
115 aa protein
accession:XP_003865283.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 72.0 | 72.0 | 38% | 7e-12 | 26.24% | XP_047305371.1 | |
| 2 | 65.1 | 65.1 | 31% | 8e-10 | 28.57% | XP_036016771.1 | |
| 3 | 52.4 | 191 | 8% | 4e-07 | 47.62% | XP_003865283.1 | |
| 4 | 50.4 | 50.4 | 8% | 2e-06 | 40.91% | NP_001255048.1 | |
| 5 | 52.4 | 52.4 | 7% | 4e-06 | 53.85% | XP_003521358.1 |