Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: Q1HN42.1 RecName: Full=Brain-derived neurotrophic factor; Short=BDNF; Flags: Precursor [Chilabothrus striatus] ... Query length: 223 aa

neurotrophin-3 isoform b preproprotein ...

neurotrophin-3 isoform b preproprotein [Mus musculus]

258 aa protein

accession:NP_001397057.1

Alignment Sequence Identical proteins

neurotrophin-3 isoform X1 ...

neurotrophin-3 isoform X1 [Rattus norvegicus]

258 aa protein

accession:XP_063142820.1

Alignment Sequence Identical proteins

neurotrophin-4 isoform X2 ...

neurotrophin-4 isoform X2 [Homo sapiens]

210 aa protein

accession:XP_047294847.1

Alignment Sequence Identical proteins

Query: RecName: Full=Brain-derived neurotrophic factor; Short=BDNF; Flags: Precursor ...

RecName: Full=Brain-derived neurotrophic factor; Short=BDNF; Flags: Precursor [Chilabothrus striatus]

223 aa protein

accession:Q1HN42.1

Sequence Identical proteins

brain-derived neurotrophic factor isoform X2 ...

brain-derived neurotrophic factor isoform X2 [Danio rerio]

270 aa protein

accession:XP_068078476.1

Alignment Sequence Identical proteins

brain-derived neurotrophic factor isoform X1 ...

brain-derived neurotrophic factor isoform X1 [Danio rerio]

298 aa protein

accession:XP_068078475.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_068078476.1\|	brain-derived neurotrophic factor isoform X2 [Danio rerio]	281	281	100%	4e-95	64.78%	XP_068078476.1
2 Select seq ref\|NP_001397057.1\|	neurotrophin-3 isoform b preproprotein [Mus musculus]	157	157	65%	7e-47	52.35%	NP_001397057.1
3 Select seq ref\|XP_063142820.1\|	neurotrophin-3 isoform X1 [Rattus norvegicus]	156	156	65%	3e-46	51.68%	XP_063142820.1
4 Select seq ref\|XP_047294847.1\|	neurotrophin-4 isoform X2 [Homo sapiens]	135	135	67%	1e-38	49.38%	XP_047294847.1
5 Select seq ref\|XP_068078475.1\|	brain-derived neurotrophic factor isoform X1 [Danio rerio]	281	281	100%	5e-95	64.78%	XP_068078475.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments