Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q5BBX9.2
RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C [Aspergillus nidulans FGSC A4]
...
Query length:
236 aa
DOMAINS: and other(s) domains
...
U1 snRNP-associated protein Usp103
...
U1 snRNP-associated protein Usp103 [Schizosaccharomyces pombe]
182 aa protein
accession:NP_595384.1
Query: RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C
...
RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C [Aspergillus nidulans FGSC A4]
236 aa protein
accession:Q5BBX9.2
U1 small nuclear ribonucleoprotein C
...
U1 small nuclear ribonucleoprotein C [Danio rerio]
159 aa protein
accession:NP_775358.1
U1 small nuclear ribonucleoprotein C
...
U1 small nuclear ribonucleoprotein C [Homo sapiens]
159 aa protein
accession:NP_003084.1
U1 small nuclear ribonucleoprotein C isoform 1
...
U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]
159 aa protein
accession:NP_035562.1
small ribonucleoprotein particle U1 subunit C
...
small ribonucleoprotein particle U1 subunit C [Drosophila melanogaster]
145 aa protein
accession:NP_650767.1
DOMAINS: and other(s) domains
...
U1 snRNP-associated protein Usp103 [Schizosaccharomyces pombe]
182 aa protein
accession:NP_595384.1
RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP C; Short=U1-C; Short=U1C [Aspergillus nidulans FGSC A4]
236 aa protein
accession:Q5BBX9.2
U1 small nuclear ribonucleoprotein C [Danio rerio]
159 aa protein
accession:NP_775358.1
U1 small nuclear ribonucleoprotein C [Homo sapiens]
159 aa protein
accession:NP_003084.1
U1 small nuclear ribonucleoprotein C isoform 1 [Mus musculus]
159 aa protein
accession:NP_035562.1
small ribonucleoprotein particle U1 subunit C [Drosophila melanogaster]
145 aa protein
accession:NP_650767.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 90.1 | 90.1 | 24% | 3e-21 | 63.16% | NP_775358.1 | |
| 2 | 89.7 | 89.7 | 24% | 4e-21 | 63.16% | NP_003084.1 | |
| 3 | 89.0 | 89.0 | 24% | 7e-21 | 63.16% | NP_035562.1 | |
| 4 | 87.0 | 87.0 | 23% | 6e-20 | 57.14% | NP_595384.1 | |
| 5 | 85.5 | 85.5 | 25% | 1e-19 | 57.63% | NP_650767.1 |