Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q63262.2
RecName: Full=POU domain, class 3, transcription factor 3; AltName: Full=Brain-specific homeobox/POU domain protein 1; Short=Brain-1; Short=Brn-1 [Rattus norvegicus]
...
Query length:
497 aa
DOMAINS: and other(s) domains
...
POU domain, class 2, transcription factor 2 isoform 10
...
POU domain, class 2, transcription factor 2 isoform 10 [Mus musculus]
424 aa protein
accession:NP_001404069.1
POU domain, class 2, transcription factor 2 isoform X17
...
POU domain, class 2, transcription factor 2 isoform X17 [Homo sapiens]
438 aa protein
accession:XP_047294923.1
POU domain, class 2, transcription factor 1 isoform X3
...
POU domain, class 2, transcription factor 1 isoform X3 [Rattus norvegicus]
745 aa protein
accession:XP_063128060.1
ventral veins lacking, isoform D
...
ventral veins lacking, isoform D [Drosophila melanogaster]
427 aa protein
accession:NP_001286957.1
Query: RecName: Full=POU domain, class 3, transcription factor 3; AltName: Full=Brain-specific homeobox/POU domain protein 1; Short=Brain-1; Short=Brn-1
...
RecName: Full=POU domain, class 3, transcription factor 3; AltName: Full=Brain-specific homeobox/POU domain protein 1; Short=Brain-1; Short=Brn-1 [Rattus norvegicus]
497 aa protein
accession:Q63262.2
POU domain, class 3, transcription factor 2
...
POU domain, class 3, transcription factor 2 [Danio rerio]
378 aa protein
accession:NP_571235.1
DOMAINS: and other(s) domains
...
POU domain, class 2, transcription factor 2 isoform 10 [Mus musculus]
424 aa protein
accession:NP_001404069.1
POU domain, class 2, transcription factor 2 isoform X17 [Homo sapiens]
438 aa protein
accession:XP_047294923.1
POU domain, class 2, transcription factor 1 isoform X3 [Rattus norvegicus]
745 aa protein
accession:XP_063128060.1
ventral veins lacking, isoform D [Drosophila melanogaster]
427 aa protein
accession:NP_001286957.1
RecName: Full=POU domain, class 3, transcription factor 3; AltName: Full=Brain-specific homeobox/POU domain protein 1; Short=Brain-1; Short=Brn-1 [Rattus norvegicus]
497 aa protein
accession:Q63262.2
POU domain, class 3, transcription factor 2 [Danio rerio]
378 aa protein
accession:NP_571235.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 377 | 377 | 100% | 4e-127 | 50.50% | NP_571235.1 | |
| 2 | 315 | 315 | 35% | 3e-102 | 87.36% | NP_001286957.1 | |
| 3 | 209 | 209 | 29% | 1e-61 | 63.69% | NP_001404069.1 | |
| 4 | 209 | 209 | 38% | 2e-61 | 55.28% | XP_047294923.1 | |
| 5 | 213 | 213 | 31% | 3e-60 | 60.00% | XP_063128060.1 |