Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
Q6T3U4.1
RecName: Full=NPC1-like intracellular cholesterol transporter 1; AltName: Full=Niemann-Pick C1-like protein 1; Short=Npc1l1; Flags: Precursor [Mus musculus]
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Query length:
1333 aa
DOMAINS: and other(s) domains
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SSD domain-containing protein
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SSD domain-containing protein [Caenorhabditis elegans]
1266 aa protein
accession:NP_001360447.1
NPC intracellular cholesterol transporter 1 isoform X3
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NPC intracellular cholesterol transporter 1 isoform X3 [Glycine max]
1284 aa protein
accession:XP_040865074.1
sphingolipid transporter
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sphingolipid transporter [Saccharomyces cerevisiae S288C]
1170 aa protein
accession:NP_015319.1
Niemann-Pick type C-1a, isoform E
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Niemann-Pick type C-1a, isoform E [Drosophila melanogaster]
1283 aa protein
accession:NP_001285795.1
Query: RecName: Full=NPC1-like intracellular cholesterol transporter 1; AltName: Full=Niemann-Pick C1-like protein 1; Short=Npc1l1; Flags: Precursor
...
RecName: Full=NPC1-like intracellular cholesterol transporter 1; AltName: Full=Niemann-Pick C1-like protein 1; Short=Npc1l1; Flags: Precursor [Mus musculus]
1333 aa protein
accession:Q6T3U4.1
NPC1-like intracellular cholesterol transporter 1 isoform X2
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NPC1-like intracellular cholesterol transporter 1 isoform X2 [Homo sapiens]
857 aa protein
accession:XP_047276236.1
DOMAINS: and other(s) domains
...
SSD domain-containing protein [Caenorhabditis elegans]
1266 aa protein
accession:NP_001360447.1
NPC intracellular cholesterol transporter 1 isoform X3 [Glycine max]
1284 aa protein
accession:XP_040865074.1
sphingolipid transporter [Saccharomyces cerevisiae S288C]
1170 aa protein
accession:NP_015319.1
Niemann-Pick type C-1a, isoform E [Drosophila melanogaster]
1283 aa protein
accession:NP_001285795.1
RecName: Full=NPC1-like intracellular cholesterol transporter 1; AltName: Full=Niemann-Pick C1-like protein 1; Short=Npc1l1; Flags: Precursor [Mus musculus]
1333 aa protein
accession:Q6T3U4.1
NPC1-like intracellular cholesterol transporter 1 isoform X2 [Homo sapiens]
857 aa protein
accession:XP_047276236.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1196 | 1196 | 57% | 0.0 | 76.38% | XP_047276236.1 | |
| 2 | 870 | 870 | 91% | 0.0 | 38.61% | NP_001285795.1 | |
| 3 | 642 | 642 | 96% | 0.0 | 32.94% | XP_040865074.1 | |
| 4 | 460 | 460 | 92% | 3e-140 | 28.64% | NP_015319.1 | |
| 5 | 175 | 175 | 50% | 2e-43 | 23.99% | NP_001360447.1 |