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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query: Q74230.3 RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag [HIV-2 B_EHO] ... Query length: 519 aa
Query: RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag ...
RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; Contains: RecName: Full=Matrix protein p17; Short=MA; Contains: RecName: Full=Capsid protein p24; Short=CA; Contains: RecName: Full=Spacer peptide 1; Short=SP1; AltName: Full=p2; Contains: RecName: Full=Nucleocapsid protein p7; Short=NC; Contains: RecName: Full=Spacer peptide 2; Short=SP2; AltName: Full=p1; Contains: RecName: Full=p6-gag [HIV-2 B_EHO]
519 aa protein
accession:Q74230.3
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 ...
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
708 aa protein
accession:XP_047305371.1
igE-binding protein-like ...
igE-binding protein-like [Mus musculus]
606 aa protein
accession:XP_036016771.1
CCHC-type zinc finger, nucleic acid binding protein a ...
CCHC-type zinc finger, nucleic acid binding protein a [Danio rerio]
163 aa protein
accession:NP_001231665.1
cold shock domain protein 1 ...
cold shock domain protein 1 [Arabidopsis thaliana]
265 aa protein
accession:NP_001329650.1
universal minicircle sequence binding protein, putative ...
universal minicircle sequence binding protein, putative [Leishmania donovani]
115 aa protein
accession:XP_003865283.1

Descriptions

Best hits

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Best hits producing significant alignments
Select for downloading or viewing reports Description Max score Total score Query cover E value Ident Accession
1
endogenous retrovirus group K member 5 Gag polyprotein isoform X2 [Homo sapiens]
74.7 74.7 27% 9e-1332.34% XP_047305371.1
2
igE-binding protein-like [Mus musculus]
65.9 65.9 27% 5e-1029.61% XP_036016771.1
3
CCHC-type zinc finger, nucleic acid binding protein a [Danio rerio]
51.2 219 16% 3e-0650.00% NP_001231665.1
4
universal minicircle sequence binding protein, putative [Leishmania donovani]
49.7 140 9% 3e-0638.00% XP_003865283.1
5
cold shock domain protein 1 [Arabidopsis thaliana]
49.7 124 11% 3e-0539.06% NP_001329650.1